Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004457696 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 72723017 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCATTCATCTCGTATGC | 573395 | 0.7884642629719281 | TruSeq Adapter, Index 3 (97% over 36bp) |
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTCGAGTAGTTGGGATTATA | 241444 | 0.33200492768334955 | No Hit |
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTTAAGTAGTTGGGATTATA | 198143 | 0.2724625684877733 | No Hit |
CGGGCGTAGTGGCGGGCGTTTGTAGTTTTAGTTATTTGGGAGGTTGAGGT | 88323 | 0.12145123187064695 | No Hit |
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTTGAGTAGTTGGGATTATA | 74689 | 0.10270338481694179 | No Hit |