Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004457706 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 80150998 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGAGCATCTCGTATGC | 4112573 | 5.131031556213436 | TruSeq Adapter, Index 1 (97% over 37bp) |
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATGAGCATCTCGTATGCC | 93553 | 0.1167209421397348 | TruSeq Adapter, Index 1 (97% over 36bp) |
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTCGAGTAGTTGGGATTATA | 87232 | 0.10883457745591639 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGAGCAGCTCGTATGC | 83572 | 0.10426819638602629 | TruSeq Adapter, Index 1 (97% over 37bp) |