Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004457723 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 67716242 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGTAGCATCTCGTATGC | 3898672 | 5.7573661574427 | TruSeq Adapter, Index 22 (97% over 37bp) |
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTCGAGTAGTTGGGATTATA | 171782 | 0.2536791690241759 | No Hit |
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTTAAGTAGTTGGGATTATA | 139675 | 0.2062651379856549 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGTAGCAGCTCGTATGC | 81238 | 0.11996826403922414 | TruSeq Adapter, Index 22 (97% over 37bp) |
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGGTAGCATCTCGTATGCC | 69603 | 0.10278627098060167 | TruSeq Adapter, Index 22 (97% over 36bp) |