Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004457782 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 64481252 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCCGAATCTCGTATGC | 807567 | 1.2524058931113806 | TruSeq Adapter, Index 6 (97% over 36bp) |
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTCGAGTAGTTGGGATTATA | 198690 | 0.3081360765141471 | No Hit |
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTTAAGTAGTTGGGATTATA | 169016 | 0.26211649860644765 | No Hit |
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTTGAGTAGTTGGGATTATA | 76130 | 0.11806532540652281 | No Hit |