FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004671128

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004671128
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475515
Sequences flagged as poor quality0
Sequence length35-75
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGTTAAGAAAAACAGCTACTGCATGCTG35900.7549709262588983No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGTTAAGAAAAACAGCTACTGCATGCTG29700.6245859752058295No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)