FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004671135

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004671135
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences208480
Sequences flagged as poor quality0
Sequence length35-76
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT19950.9569263238679969No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT14880.7137375287797391No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2210.10600537221795855No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)