FastQCFastQC Report
Thu 23 Feb 2023
EGAF00004671823

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004671823
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121116489
Sequences flagged as poor quality0
Sequence length101
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATAAAACCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT7262480.5996276857067744No Hit
GGTATAAAACCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA1929620.15931934750849655No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)