FastQCFastQC Report
Mon 6 Mar 2023
EGAF00004671830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004671830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences123979997
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCACGCAAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT8140920.6566317306815227No Hit
CTCCACGCAAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA2919880.23551218508256616No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)