FastQCFastQC Report
Fri 24 Mar 2023
EGAF00004671853

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004671853
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82508821
Sequences flagged as poor quality0
Sequence length101
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTGTGGTATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT14394591.7446122518221414No Hit
ATTTGTGGTATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA4328310.5245875468272659No Hit
ATTTGTGGTATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC1003890.12167062719269736No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)