FastQCFastQC Report
Thu 23 Mar 2023
EGAF00004671860

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004671860
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83565476
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCTCCCAGGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT24958982.9867573541973242No Hit
TACCTCCCAGGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA8445671.0106649784415755No Hit
TACCTCCCAGGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC2634270.31523424817205614No Hit
GCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCA917430.10978576846735127No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)