FastQCFastQC Report
Tue 8 Aug 2023
EGAF00004675734

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004675734
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61917764
Sequences flagged as poor quality0
Sequence length98
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3174210.5126493262902712No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG651040.1051459157988974Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGCGTCATTTAAA645920.1043190125534895No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)