FastQCFastQC Report
Tue 8 Aug 2023
EGAF00004675736

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004675736
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61757031
Sequences flagged as poor quality0
Sequence length98
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3011540.4876432612183057No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG645560.10453222726979863Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGCGTCATTTAAA643180.10414684604899481No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)