FastQCFastQC Report
Thu 12 May 2022
EGAF00004675772

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004675772
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences358200609
Sequences flagged as poor quality0
Sequence length98
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTTCCTCGAGGGAGGCAAGGATTCCTGCCAGGGTGATTCTGGTGGCCCT7539480.21048205420555274No Hit
GTTCTGTGTGGGCTTCCTCGAGGGAGGCAAGGATTCCTGCCAGGGTGATT7005040.19556192323503283No Hit
GAAGCCTCCTACCCTGGAAAGATTACCAACAACATGTTCTGTGTGGGCTT6503650.1815644595958797No Hit
GGCAAGGATTCCTGCCAGGGTGATTCTGGTGGCCCTGTGGTCTCCAATGG6462470.18041482447619178No Hit
GCAAGGATTCCTGCCAGGGTGATTCTGGTGGCCCTGTGGTCTCCAATGGA6340640.17701365772943173No Hit
GCCAGGCTGAGTGTGAAGCCTCCTACCCTGGAAAGATTACCAACAACATG5693400.15894445338589583No Hit
GCTTCCTTGAGGGAGGCAAGGATTCATGTCAGGGTGATTCTGGTGGCCCT5670260.15829844666735338No Hit
ATTCTGGTGGCCCTGTGGTCTCCAATGGAGAGCTCCAAGGAATTGTCTCC5624740.15702765039129232No Hit
GTGGGCTTCCTCGAGGGAGGCAAGGATTCCTGCCAGGGTGATTCTGGTGG5473870.15281576475488348No Hit
GTGAAGCCTCCTACCCTGGAAAGATTACCAACAACATGTTCTGTGTGGGC5270660.14714268673954153No Hit
GTTCTGTGTGGGCTTCCTTGAGGGAGGCAAGGATTCATGTCAGGGTGATT4876200.13613042182181215No Hit
GGCAAGGATTCATGTCAGGGTGATTCTGGTGGCCCTGTGGTCTGCAATGG4779580.13343305064006744No Hit
GAAGCCTCCTACCCTGGAAAGATTACCAGCAACATGTTCTGTGTGGGCTT4760100.13288922130224518No Hit
GTCAGGGTGATTCTGGTGGCCCTGTGGTCTGCAATGGACAGCTCCAAGGA4400150.12284038299890217No Hit
GCCAGGGTGATTCTGGTGGCCCTGTGGTCTCCAATGGAGAGCTCCAAGGA4264720.11905954073908344No Hit
ATCCGCTCCGGCTGCAACGGTGACTCTGGAGGACCCCTCAACTGCCCCAC4202520.1173230836131828No Hit
GGTGATTCTGGTGGCCCTGTGGTCTCCAATGGAGAGCTCCAAGGAATTGT4060130.11334793682609288No Hit
CTCCAATGGAGAGCTCCAAGGAATTGTCTCCTGGGGCTATGGCTGTGCCC4012360.11201432658647435No Hit
GTGGGCTTCCTTGAGGGAGGCAAGGATTCATGTCAGGGTGATTCTGGTGG3892810.10867681132278588No Hit
ATTCTGGTGGCCCTGTGGTCTGCAATGGACAGCTCCAAGGAGTTGTCTCC3883560.10841857613927172No Hit
GGGTGATTCTGGTGGCCCTGTGGTCTGCAATGGACAGCTCCAAGGAGTTG3866070.10793030226255143No Hit
GGGTGATTCTGGTGGCCCTGTGGTCTCCAATGGAGAGCTCCAAGGAATTG3741900.10446380899369158No Hit
GCCTCCTACCCTGGAAAGATTACCAACAACATGTTCTGTGTGGGCTTCCT3741520.10445320041317964No Hit
GTGAAGCCTCCTACCCTGGAAAGATTACCAGCAACATGTTCTGTGTGGGC3710790.1035953012575699No Hit
ATTACCAACAACATGTTCTGTGTGGGCTTCCTCGAGGGAGGCAAGGATTC3685120.10287866372667166No Hit
GCAAGGATTCATGTCAGGGTGATTCTGGTGGCCCTGTGGTCTGCAATGGA3643170.1017075322727885No Hit
GGAAAGATTACCAACAACATGTTCTGTGTGGGCTTCCTCGAGGGAGGCAA3616250.10095599809546946No Hit
GGTGATTCTGGTGGCCCTGTGGTCTGCAATGGACAGCTCCAAGGAGTTGT3584700.10007520673980765No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)