FastQCFastQC Report
Sat 1 Apr 2023
EGAF00004678120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004678120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32155652
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA741910.2307246016967717No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG577170.17949255079635767No Hit
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGG391610.1217857439183631No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)