FastQCFastQC Report
Sun 2 Apr 2023
EGAF00004678208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004678208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50786962
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA879660.17320587122340572No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG619300.1219407453432635No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)