FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004679191

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004679191
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67989691
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG54550.019.19253545
CGTATGC57400.018.11824446
TATGCCG61450.017.20584748
TATCTCG63500.015.72256141
CTCGTAT63850.015.69170944
GATCGGA92450.012.5279571
TCTCGTA84400.011.78887743
ACACGTC103700.010.93370713
ATCGGAA116000.010.6253712
CGTCTGA106600.010.53773516
ATCTCGT100400.010.2550242
ATGCCGT107500.010.25446349
ACGTCTG117100.09.85942615
CACGTCT137700.08.561172514
GCCGTCT136500.08.25354551
CACACGT161050.07.750738612
CCGTCTT148850.07.73182452
GCACACG153750.07.68953411
GTATGCC150600.07.64218147
TGCCGTC145600.07.57112450
Produced by FastQC (version 0.11.5)