FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004679201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004679201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57653238
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC47550.019.60267846
TCGTATG48850.019.15234245
TATGCCG51050.018.73335848
CTCGTAT57250.015.07142944
GATCGGA74000.013.3420041
TCTCGTA72550.012.13181543
ACACGTC85450.012.08653513
CGTCTGA91950.011.49484616
ATCGGAA92950.011.0896322
ATGCCGT85750.011.07157349
ACGTCTG99050.010.70602915
ATCTCGT84500.010.62070442
CACGTCT112850.09.48947414
GATCTCG97450.09.24484241
GCCGTCT111150.08.57255951
GCACACG125250.08.54949211
TGCCGTC115700.08.38526550
CACACGT130850.08.26384712
TCGGAAG138350.07.998153
CCGTCTT126350.07.952664452
Produced by FastQC (version 0.11.5)