FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004679211

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004679211
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78202938
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC52550.08.84636346
TCGTATG53800.08.38333445
TATGCCG54700.08.17950948
CTCGTAT65200.06.54604344
AGATCGG111400.06.04132670
GATCGGA90300.05.5049231
AATCTCG83850.05.37978841
CGTCTGA111900.05.02105316
Produced by FastQC (version 0.11.5)