FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004679217

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004679217
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75397412
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC48750.06.616147546
TCGTATG48200.06.476054745
TATGCCG53700.06.26318948
AGATCGG105750.05.96876870
TAGATCG47950.05.71389470
CTCGTAT62450.05.221020744
GATCGGA84750.05.1970670
Produced by FastQC (version 0.11.5)