FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004679225

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004679225
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15988857
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGCGA26050.082.855181
TTACGCG10000.081.182479
TTTGCGC25150.080.82381
ACGACCG24450.080.416891
CGGTACG24850.077.932651
GTGCGAC29050.075.31651
TTACCCG33350.070.038331
CGCCGAA28300.069.999171
GCGCGTA24900.068.573631
GCGCTAG28550.066.797181
GACGCGT24050.064.542941
CGAACGC30050.064.44681
GCCGGAT30750.063.941241
GGCGACT32300.063.8478431
TAGGCGC31850.063.5895351
CGTTGCG12850.063.179597
CCGCTAT30900.062.6739961
CCTTACG28750.061.9617581
AACGCGT19950.061.8254663
TCGTACG30750.061.5233088
Produced by FastQC (version 0.11.5)