FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004679232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004679232
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18295486
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT20150.088.143166
ACGACGC21650.083.041225
CACGACG22900.078.507544
GACGCTC34000.053.516787
TACACGA35800.051.6373832
ACGCTCT40200.044.721968
CTACACG43050.044.186291
ACACGAC47450.038.958223
CGCTCTT53750.033.717799
TAACCCT670700.05.9771536
CTAACCC710450.05.8060225
CCCTAAC746200.05.6638083
CCTAACC738100.05.6473914
ACCCTAA741850.05.5701362
AACCCTA722700.05.5589171
CGATGAG26605.5941564E-65.52216431
GTTCCGA46251.4224497E-95.01572137
Produced by FastQC (version 0.11.5)