FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004682614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004682614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60440135
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1069210.17690397283196008No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA809050.1338597274807543No Hit
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGG799560.13228957877079525No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)