FastQCFastQC Report
Sun 5 Jun 2022
EGAF00004682868

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004682868
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52511151
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG817840.1557459671756195No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA749350.14270302321120326No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG590410.11243516638970645No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)