EGAF00004683380 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004683380
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	33850137
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA	99389	0.29361476439519285	No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG	86289	0.254914773313916	No Hit
CAGGGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAG	49097	0.14504224901659923	No Hit
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC	48590	0.14354447073582005	No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG	44477	0.1313938552154161	No Hit
GTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTAGCGT	43145	0.12745886375585422	No Hit
ATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGA	38486	0.11369525624076499	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGCTTAG	13335	15.647086	45
AGGGATC	18265	15.547559	2
ATAGGGG	13545	15.369748	38
GGCATAG	14220	14.579536	35
GTCACTC	19975	13.744246	8
GAGCTTA	15380	13.727384	44
CAGGGAT	21985	13.562141	1
GGTCACT	20060	13.53987	7
CATAGGG	15815	13.249807	37
GGGAGGT	21905	13.20007	3
TGGCATA	15945	13.172466	34
GTTGTCG	1840	12.97199	26
AGGTCAC	21780	12.955804	6
GGAGGTC	22500	12.731086	4
ACTCTCC	21855	12.635267	11
GAGGTCA	23165	12.47238	5
GGGATCA	23075	12.443075	3
GCATAGG	16955	12.3337145	36
TCACTCT	23495	11.972232	9
CACTCTC	23405	11.884299	10