EGAF00004683452 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004683452
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34763918
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA	100352	0.28866711744056006	No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG	71108	0.2045454140123101	No Hit
GTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTAGCGT	43590	0.12538862851994992	No Hit
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC	40746	0.1172077324540922	No Hit
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGG	39999	0.11505895279122452	No Hit
ATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGA	37373	0.10750514369525321	No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG	35534	0.10221517609148659	No Hit
CAGGGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAG	35430	0.1019160153352105	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTGTAA	1960	16.993553	45
AGCTTAG	10990	16.709793	45
ATAGGGG	11985	15.569519	38
GGCATAG	12635	14.608242	35
AGGGATC	15795	14.492705	2
GTCACTC	17140	13.765848	8
GAGCTTA	13630	13.754079	44
CATAGGG	13760	13.5284195	37
GGGAGGT	19290	13.17337	3
ACTCTCC	18535	12.839484	11
GCATAGG	14575	12.710167	36
TGGCATA	14825	12.480718	34
AGGTCAC	19470	12.429008	6
CAGGGAT	19935	12.395747	1
GGTCACT	19175	12.374184	7
GGAGGTC	20395	12.316758	4
GAGGTCA	20985	11.885129	5
TCACTCT	21270	11.272815	9
TATCCTA	7650	11.171294	5
TGTATCC	8335	11.0888605	3