FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004683920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004683920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2760433
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41960.15200513832431362No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTCGC36508.731149E-115.9591388
TCTCGCT40904.9112714E-115.6725949
Produced by FastQC (version 0.11.5)