FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004683941

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004683941
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2527526
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCGTCG4856.6405657E-411.959303145
AGTAGCG8558.569916E-48.479915145
CGGAGTC27252.9177681E-75.8546344
GGGGGGG257850.05.5674415145
CCTTTAG15750.008464485.52515175
GTCTCGC36054.4016815E-75.02896176
AGTCTCG37602.0415246E-75.01451645
Produced by FastQC (version 0.11.5)