FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004683956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004683956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1689421
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCAATC5801.616063E-75.75010240-44
GTCTCGC20601.6295009E-45.6310014
ACGGAGT18250.0012331785.5617433
GAGTCTC38001.4915713E-95.5329932
AGACGGA19300.0024944665.25931641
TCGCTCT21250.0014902485.11773827
AGTCTCG21250.0014902485.11773823
GACGGAG20300.00468522545.00008872
Produced by FastQC (version 0.11.5)