FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684002

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684002
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2776676
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31770.114417382510599No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG6652.4583132E-67.632829145
AGCGTCG8702.6921043E-107.5012283145
CGGAAGA23605.44917E-65.8378205145
AGATCGG15450.05.256355140-144
GATCGGA15800.05.2317004140-144
Produced by FastQC (version 0.11.5)