FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684016

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684016
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1990420
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGATAG1200.0039154139.666457105-109
TAGTTAG8550.0080764617.63141353
CGGAGTC16504.7931288E-56.59093144
GTCTCGC23309.649921E-86.5350148
ATAGTTA15600.00115895566.0419912
TCTGTCG20501.520457E-45.6584143
TCTCGCT26205.3544536E-65.53492649
AGTCTCG24004.418094E-55.4379297
Produced by FastQC (version 0.11.5)