FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4147988
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGATCC6700.0096928148.656852145
ACGGAGT53550.05.8228765
GGCGAAT16200.00182349865.8179917145
CGGAGTC45252.5465852E-115.448656
TGAGACG48607.2759576E-125.37336871
GACGGAG55950.05.3138874
AGACGGA54507.2759576E-125.05613
Produced by FastQC (version 0.11.5)