FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684020

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684020
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2474710
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTCGC30952.577508E-96.0905314
AGTCTCG31804.791218E-95.92761333
ACGGAGT28456.74936E-75.60627033
CGGAGTC23653.5032266E-55.51802644
GAGTCTC59600.05.23096946
TGAGACG25058.706396E-55.20984461
TCTCGCT35152.5785266E-75.1567335
GGAGTCT60700.05.1361745
Produced by FastQC (version 0.11.5)