FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684034

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684034
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3613674
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG85250.23590949266591288No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATGTCG4800.00834269910.5731233
CGGAGTC33100.07.6662074
TCGTGAA9850.00345734587.360347145
ACGGAGT41200.06.51104933
GGAGTCT85650.06.09477475
GACGGAG45000.05.96147542
GTCTCGC44603.6379788E-125.689818
AGACGGA44201.2732926E-115.5774181
AGTCTCG46606.002665E-115.2900237
Produced by FastQC (version 0.11.5)