FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684046

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684046
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2152604
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATGCA11050.00132337817.217021145
CGGAGTC19751.3314591E-56.24079138
AGTCCAT12800.0061909796.2307539
TGAGACG21504.893091E-55.73282053
AGTCTCG26456.334625E-65.4822929
GACGGAG25502.0053723E-55.4020826
AGACGGA26303.3532117E-55.23763855
ACGGAGT23752.19384E-45.18971067
GCGGGCA18200.00720605955.1788089
Produced by FastQC (version 0.11.5)