FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684049

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684049
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3224741
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTAGCG10457.300012E-47.632144145
CACGCCG11800.00264587726.758975145
ACGGAGT37603.7714926E-85.2063415
CGGAGTC32651.7199854E-65.1070219
GGGGGGG414300.05.0927014145
Produced by FastQC (version 0.11.5)