FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2094821
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTCGCC3100.00584452814.033337145
CGGAGTC20909.3152266E-86.93767079
AGACGGA26756.4210326E-106.77703056
TGAGACG21551.6214472E-76.7298594
ACGGAGT25457.70724E-86.2670748
GACGGAG27806.8439476E-85.998097
GGGGGGG218050.05.120779145
Produced by FastQC (version 0.11.5)