FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2286933
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGACG23803.6379788E-107.3109274
ACGGAGT25204.2283136E-76.04193268
CGGAGTC21203.9507442E-55.81393539
AGTCTCG28901.5017758E-75.770159
AGACGGA27602.2862278E-65.51642666
GACGGAG27802.6095622E-65.476867
Produced by FastQC (version 0.11.5)