FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004684217

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684217
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63151638
Sequences flagged as poor quality0
Sequence length63-76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2331330.3691638212139486No Hit
GCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGG1756980.2782160614741299No Hit
TCTCCCACTAGATCCTGTATTATCCATCTACATCAGAACCAAACTACTTC1246310.19735196733931112No Hit
TGCCGTCTACAGGGATGACCTGAAGAAATTGCTAGAGACCGAGTGTCCTC721770.11429157229460936No Hit
GCTCTAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGG657390.10409706237548423No Hit
GCTTCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGG653320.10345258186335562No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)