FastQCFastQC Report
Mon 6 May 2024
EGAF00004684223

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684223
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54935286
Total Bases4.1 Gbp
Sequences flagged as poor quality0
Sequence length62-76
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2647920.48200713836276377No Hit
CCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACTA625320.11382847811150013No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)