FastQCFastQC Report
Thu 12 May 2022
EGAF00004684237

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684237
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62431961
Sequences flagged as poor quality0
Sequence length62-76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3409790.5461609639332008No Hit
GCCCACTTTAGATGTATCTAATTCTCCTGACTGTTCTTCCCAGGGGAGTG3130770.5014691113098306No Hit
TCCGCCAGTACTTTACCGTCTTCGACAGGGCAAACAACCAGGTCGGCCTG1292240.20698372745331517No Hit
GCCAGTACTTTACCGTCTTCGACAGGGCAAACAACCAGGTCGGCCTGGCC1185880.18994758149595845No Hit
GTGCCCACTTTAGATGTATCTAATTCTCCTGACTGTTCTTCCCAGGGGAG1163430.18635166689702412No Hit
TCCGTTTGTTTTTCCAAAATACTTTATTCTCTCATACATAGTATTTTCAT1071180.17157558129561234No Hit
GGGCATGAACCTCCCCACCGAATCTGGAGAGCTTTGGATCCTGGGTGATG755030.1209364543266549No Hit
GGGGAGTGTGGAGGTCTTGGCCCTGTTCCCTGTCCTACCAATAACGTAGAATAAAAACATAACCCACTGAAAAAA743290.11905600722681127No Hit
ACCGTCTTCGACAGGGCAAACAACCAGGTCGGCCTGGCCCCCGTGGCTTA641130.1026925936220392No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)