FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684380

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684380
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128
Sequences flagged as poor quality0
Sequence length35-76
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAGCTCTTTGTG21.5625No Hit
GGGTTTGCTGAAGATGGCGGTATATAGGCTGAGCAAGAGGTGGTGAGGTT10.78125No Hit
CCTACTTCTCCTATCTCTCCCAGTCCTAGCTGCTGGCATCACTATACTACTAACAGACCGCAACCTCAACACCAC10.78125No Hit
CTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCG10.78125No Hit
ACTCCTTGGCGATGGCAAAGGGCTTCTCCACCTCGATCATGCCGCAGTCTGCGATGATCACATCCTTCACGGG10.78125No Hit
CCATGACAACAGACACATTGACATGGGTGGGTTTACCCGCCAAGCGGTCGATGGTCTTCTGTGTGAAGGCCAG10.78125No Hit
CACAAACTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGT10.78125No Hit
ATCCACTCCAGTCCCTTGCCTGGGGTCTGCCGGACCCAACTCCAATGATAATTAGTGATGAAACCACCAGAGACA10.78125No Hit
GGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCG10.78125No Hit
CCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCG10.78125No Hit
ATTGAATTCCCAGCCCCATTGGGGAGTGATCTCTTGGACACAGAGCCCCCATTCAAAATGGGGCAGGGCAAGGG10.78125No Hit
GTGACATCCAGATGACCCAGTCTCCTTCCACCTTGTCTGCATATGTGGGAGACAGAGTCCCCATCACTTGCCGGG10.78125No Hit
AGGCTGATGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTTCAGTGAGCTGAGGTCGCACCACTGCACTCCA10.78125No Hit
GAATATGGAGAAGTAATTCAGCTACAGGGTGACCAACGCAAGAACATATG10.78125No Hit
CTTCTTGGGCTTTCACATGAACAGCCTTAATAAAAACCGCCAGGACTCCCCAGAAAAGCAAATGGTTCTTCA10.78125No Hit
CCAAAGAATAAACTCCATGATACACCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAGATA10.78125No Hit
CTCTCAGGCCGGTCAGTGTGAACGTGAGGTTCGCTTCTGAACCTAAGAGC10.78125No Hit
CCCCTATTGCGGTCCTCCAGCTCATCTTTCACATCACCCCCCTACTCCTACTTGGATTTAATTATACTAAT10.78125No Hit
AGGCCAGCGGCAGGGCCTCGTGGCCCACCATGCAGGAGAAGGTGTCCCCC10.78125No Hit
GCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTC10.78125No Hit
AGACAGCCAGTGGCTTGTGCAACCCACCCTCATCTCTTCCATGGCCCAGTCCCAGGG10.78125No Hit
CACAACAGAAGATTCAACAAATCAGTAGACACGAACAACGACCACATCTCCCAGAATTTGAGCAATCTGAAA10.78125No Hit
GTATTCTCCACACAGCCAAGGACCAACAGCCAACCCTAGACTCCAGACGCCAAGACCAACTCAAAAACAACACG10.78125No Hit
CAACAGACACATTGACATGGGTGGGTTTACCCGCCAAGCGGTCGATGGTCTTCTGTGTGAAGGCCAGCGGCAGGG10.78125No Hit
GCCTCATCCTCAAACTGAAGGTTGGAGATGGTGAGGTAGCGGTCAGCCCC10.78125No Hit
AACTGTGGCTGCACCATCTGTCTTCATCTTACCGCAATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTG10.78125No Hit
CTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGT10.78125No Hit
CTCAAGCTCCTAACCATCCTTTCATTATCTGTAACACTCTCATATAAAAAACACCAATCCAACGAGAAAAAAA10.78125No Hit
GCCTTAACCCCAGATGCCTGCTATCCTGACTAATTTAAGTCATTGCTGACTGCATAGCTCTTTTTCTTGAGAGG10.78125No Hit
GTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGAAATTTTTAATGCAGGTTTGGTAGTTTAGGA10.78125No Hit
GGTAATAAATATGCTAACTTTCTGAATCAAAATGGAGAGCCTCTCAAGAAAAAGAGCTATGCAGTCAGCAATGA10.78125No Hit
GTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACACAGT10.78125No Hit
GGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAGAGGGAGAAGTGGG10.78125No Hit
CTGTAGGAGACCGAGTCACCATCACTTGCCGGGCCAGTCAGAGAATTCCT10.78125No Hit
GGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTTAGTGC10.78125No Hit
CAGGGTTTACCCGCCAAGCGGTCGATGGTCTTCTGTGTGAAGGCCAGCGG10.78125No Hit
AAAAAACATTACCATAAATAAAAAAAACAACAAGGACAAGCCACAGCTCAAATATTAACTCAAATAACAAAAAA10.78125No Hit
GCCGGGGGGCGGGCGCCGGCGGCTTTGGTGAATCTAGATAACCTCGGGCCGATCCCACGCCCC10.78125No Hit
GTTAGTGGGGTCTTCAACTCGGGGTGGGCAGAAGTGCAGGAGAAGGTCTCCCCATGGTTCCATGGCTGGGCACAG10.78125No Hit
ACCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCC10.78125No Hit
AAGCCGGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAATGTCTGGATGAGGTGGGTC10.78125No Hit
ACAGGATGAAAATTTTCTAGCTCGTTTTAAGGAAAAGCCATAGCATAACT10.78125No Hit
GAGTACGGGAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTCCAGACCCAGGTCTTCATTTCTCTGTTG10.78125No Hit
ATACCACAGGACTGTTAGTGTCCCACGTCGCACAATAATAATCAGCCTCATACTCAAAATGAAGGTTGGAGATGG10.78125No Hit
GTGAAGCACTAAACGAATCCCAGCCAGGATGTGACTGTGCCCTGCCCAGTTGCCCCAACAACCCCCATCAGGCC10.78125No Hit
CAGCCTCCTAAGCTGCTCATTTACTGGGCATCTATCCGAGAATCCGGGGT10.78125No Hit
GTCCATTTGCAGATACAACGTGTTCTTGGCGTTGTCTCTGGAGATGGTGA10.78125No Hit
GTTCCATGGCTGGGCACAGCCAGGCAGGACACTGGACACGCTGTAGCAGCCACAGAGGTCACGCTCAGGTGGTC10.78125No Hit
AGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCAGCTGGGGCCTGCCAGGTGACTCACAAGGCTGAA10.78125No Hit
GCGTTATCCACCTTCCACTGAACTTGGCCTCTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTC10.78125No Hit
CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGC10.78125No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGG10.78125No Hit
TCAGATGGCGGGAAGATGAAGACAGATGGTGCAGCCACAGTACGTTTGATTTCCACCTTGGTCCCTTGGCCGAA10.78125No Hit
CTGCTATTGGCGAAGGACGAGATCTTCAGCGCTTCCCCAAGCCTGGAGGA10.78125No Hit
AACCGCTCCCGAGCACGGCGGCGGCGTCGTCTCCCGGCAGTGCACCTGCCGCAACCCCAGCCCTCAGCCCGCCGG10.78125No Hit
CCAGTACACCACGAGCAGCCAGCTGACCCTGCAGGCCACACAGTGCCTAGCCGGCAAGTCCGTGACATTCCACGT10.78125No Hit
GAGTATGAACATATAATTAAGAAGTGATTACCTAATAAAGATAACAATGTGACTATTTTAATTATTTTGGTGGCA10.78125No Hit
GTATCAACGAACAGTACTTGAAGTCATTCTAATAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA10.78125No Hit
GAAGGTATAGCGGTTAGTCCTTGCTATATTATGCTTTGTTATAATTTTTC10.78125No Hit
GGTGCTCATCCGCGTCGACAACTCACCCGTGGCCGCTCCTGTGGCAAGCG10.78125No Hit
GTATCAACGCAGAGTACGGGAGCAGAGCTCTGGGG10.78125No Hit
GACTCAAAAGGAGCAATCCCCCAAAAAAAAAAAAACCTCACACTAGCACACAAATAAAAAGAACACAACGCCGCG10.78125No Hit
GGGGAGCGAGCCACCCTCTCCTGCAGGGCGAGTCAGAGTGTTAGATGCAGAGACTTGCGCAGGTCCCAGCACAG10.78125No Hit
TTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGC10.78125No Hit
GTTCAGCGGCGGTGGATCTGAGACAGAGTTCACTCTCACCATCAGCAGCC10.78125No Hit
CTGCTCCTCAGTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGACCCTTTTTCCACAGGGGACCTACCC10.78125No Hit
GCCACAACGTCTACCACCTCAACCAACACAACACCACAAAAAAAACGAACCAAGTAGTCTAAAACCTGCTCCAGT10.78125No Hit
GAAACAACCCACAGTACCTGCTAAATCTAATACAGTAAACAGCATGGAAATGACCATCCAAGCAAACCTCCTGAG10.78125No Hit
CAACGGTTTACCCCCCAAGCCCTCCAACTTATTCTAAAACAATCAAATCTCAACACCCACTACTCACACAATAA10.78125No Hit
ACCATGGGGAGACCTTCACCTGCACTGCTGCCCACCCCGAGTTGAAGACCCCACTAACCGCCAACATCACAAAAT10.78125No Hit
GAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGGTGGTATGCAG10.78125No Hit
ACAACAGCCACCCACGCCCACAAACATGTTCTTCAAGACCATGCTCTTCA10.78125No Hit
TGGCCGAACGTCCGAGAAAAACCATTATAGTTTTGGCAGTAATAAGTCGC10.78125No Hit
CTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGATGCTGAGGCTGTAGGTGCTGTCCTTGCTGTC10.78125No Hit
CCCCCAACACGGGAGACTAGAGCTCAAGGATACCAGGCGAGGGGTCTCTCCTC10.78125No Hit
CTCATAAAAAAATCTACTAACACAAAACAATCTAACTACTAACGAAAACCCACTACAGCAACTAAAAAAAAGC10.78125No Hit
TCCCACTTGAGGGCGTCCAGGTGAAGGTGACACCTGAGGCATCTCTCAGGCCGGTCAGTGTGCACGTGAGGTTCG10.78125No Hit
CTACCACACTACAGGACTCGCAATTCGGTCTGAAATTAGAACGTTAACCA10.78125No Hit
GGTATCAACGCAGAGTACGGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCAC10.78125No Hit
ACACGAATCCCAGCCAGGATGTGACTGTGCCCTGCCCAGTTCCCTCACCTCCACCTACCCCATGTCCCTCAACTC10.78125No Hit
TTTCCTCGTTGCTCTTTTAAGAGCTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGC10.78125No Hit
GTGTACAGGTCCCCGGAGGCATCCTGGCTAGGTGGGAAGTTTCTGGCGGT10.78125No Hit
GTTTTATACAGCTCCAACAATAAGAACCACTTAGCTTGGTACCAGCAGAA10.78125No Hit
TTTTGTAACTGAACCTTATGAAATATATGTATTTCATGGTACGTATTAAC10.78125No Hit
GACAAAGACACATAACTCATACCTCAGAAATTAAAAAAAATTAATTTAACACAGACTCCCACAACTGCATGATAT10.78125No Hit
GAGATCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTCTTACAGGGAGAAGTGGGCCGGCCAGGGGAGGGAAAG10.78125No Hit
AACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAGGAACAAAAAAAAAAAAAAAACACAA10.78125No Hit
CAGTGTGACCTGGAGCGAAAGCGGACAGGGCGTGACCGCCAGAAACTTCCCACCC10.78125No Hit
GCAGGGGAGAGTGTTAGAGGGAGAAGTGCCCCCACCTGCTCCTCAGTTCCAGCCTGACCC10.78125No Hit
CGTTCCCATCTTGGGGGGTGCTGTCGAGGCTCAGCGGGAAGACCTTGGGG10.78125No Hit
GAAAAGTGTTATTCCGCATACACACCCAAATGACACTCATACCACCGAAC10.78125No Hit
CCTTCAGTGACCACTACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGG10.78125No Hit
GGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACAACGAGAAACACAA10.78125No Hit
GTGCAGGTGAAGGTCTCCCCATGGTTCCATGGCTGGGCACAGCCAGGCAGGACACTGGACACGCTGTAGCAGCCA10.78125No Hit
GTATTAGTAGTTGGTTGGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAACTCCTGATCTATAAGGCGTCTA10.78125No Hit
GTGTAGTGCTTCACGTGGCATGTCACGGACTTGCCGTCTGGGCACTGTGT10.78125No Hit
TTTTCCTGTTGTGAAGGATGAGGGAACACAGGGAGAGAGTAAGCAGAGAG10.78125No Hit
GGTGCTGTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCA10.78125No Hit
ATCCTGGCTAGGTGGCAAGTTTCTGGCGGTAACGTTCTTTCCGCTTTCGCTCCAGGTCACACTGAGTCGCTC10.78125No Hit
GAATACCACAGGACTGTTAGTGTCCCACGTCGCACAATAATAATCAGCCT10.78125No Hit
CATCTGGGGTTAAGGCTGTTTCCACCATTTTGGTCTCACCACCATATACG10.78125No Hit
GGGCAGGGCACAGTCACATCCTGGCTGGGATTCGTGTAGTGCTTCACGTGGCATGTCACGGACTTGCCGGCTAGG10.78125No Hit
GTAGCAGGTGCCGTCCACCTCCGCCATGACAACAGACACATTGACATGGG10.78125No Hit
TCTCTGATCCCACCTCACCATTGAGAACCAGATTTGTGTACCATTTGTCTGACCTCTGTAAAAAATGTGATCCTA10.78125No Hit
CCAAGACCTAGGCACATGGACGAGATCCTAAGGCACAGGGAGAAGGGATA10.78125No Hit
GAGTAGAATGGAATGGAATGGAGATTAATGGAATTGAATGGAGACTAATG10.78125No Hit
GTAAAAAATGTGATCCTACATAAGTGGAGCTGGATAATCAGATAGTTACT10.78125No Hit
GGGCAGGAGAATCTAGGTCCAAAATGGCCGTTGCAGGAGTCCTTATCCAC10.78125No Hit
GCGTCAGGGTGCTGCTGAGGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCT10.78125No Hit
TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAGTTACC10.78125No Hit
CAACAGCAAAGAGAACAAACAAGGAAACACTGAGTAAAAACTTTCCTAAA10.78125No Hit
GATGTGACTGTGCCCTGCCCAGTTGCCCCCCCGCCCCCCGGCGTCGCCCCCCCACAGGGGGGGGCCCGCCCCGC10.78125No Hit
AGATAACAATGTGACTATTTTAATTATTTAGGTCGCAGGGACTTGGTATT10.78125No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC10.78125No Hit
GACTGAGAACTCCAGGCACCGGCTGACCCCTCAGGAGGGATTGCAGGCCC10.78125No Hit
TGGTTCCATGGCTGGGCACAGCCAGGCAGGACACTGGACACGCTGTAGCAGCCACAGAGGTCACGCTCAGGTGGT10.78125No Hit
CCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAACGGAGCAGG10.78125No Hit
TAATAAAACATGAAAAAAAATAAGCAAATTTATCACCACAATGAAAAAATAAAGATAATCTTAACAAAAAAAA10.78125No Hit
GGAACTGTTAGCCCTGCAGCATCACCTCGCTGCACATGCTCTACAGGTAC10.78125No Hit
CTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTA10.78125No Hit
GTGGAAGTCCCACAGAAGCTACACCTGCCAGGTCACGCATGAAGGGAGCA10.78125No Hit
CTCCTCAGCATCCCCGACCAGCCCCAAGGTCTTCCCGCTGCGCCTCGACAGCACCCCCCAAGATGGGAACGTGGT10.78125No Hit
CAGGGAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAAACGCA10.78125No Hit
GCCCCTAGGAGCAGCGCGGCCCACAAGCTCGCGCCGACGCCGTTCCACCCTCCGCTGGGCGCCGCCATGT10.78125No Hit
GTCCTCATCTCTGAGACAGTTCATTTGCAGAGACAGCGTCCTGCTCAAATTTTCTCTGGATATGGTGAAACGTC10.78125No Hit
CTACTAATACTTTGACTGGCCCGGCAAGTGATGGTGACTCTGTCTCCCACATATGCAGACAAGGTGGAAGGAGA10.78125No Hit
GCCCGTGAAGAGGCGGGCATGACACAGCAAGACGAGAAGACCCTATGGAGCTTTAATTTATTAATGCAAACAGTA10.78125No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA550.012.54545469