FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684381

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684381
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128
Sequences flagged as poor quality0
Sequence length27-76
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATACCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTC10.78125No Hit
CAAATACTAAACAACATCTCTAGTCACCGAATCACGATTTGACCACAGAGCCCCTATGACCCATCTCAACCTCA10.78125No Hit
GACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGG10.78125No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT10.78125No Hit
GGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATC10.78125No Hit
TCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTG10.78125No Hit
CCCCAGAAATCTTCTCAACTAATCAGAATACATACATGTAAAATATAAAAAAATTACTCTGCCTACGACTACT10.78125No Hit
TACATGAACAGTAAATCAGCAGCTTACAATTCTCACAATAAATCATCTCTAAACAACCTAAGACGAT10.78125No Hit
GTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCC10.78125No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT10.78125No Hit
GGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCA10.78125No Hit
GCAATGACTTAAATTAGTCAGGATAGCAGGCATCTGGGGTTAAGGCTGTT10.78125No Hit
TGGGAAGACCTTCACTTGCACTGCTGCCTACCCCGAGTCCAAGACCCCGCTAACCGCCACCCTCTCAAAATCCGG10.78125No Hit
CTCTTATACACCTCCGACAACAGGAACTACTTGGCTTGGTTGCAGCAGAAACCAGGACAGCCTCCTAAGGTGCT10.78125No Hit
CCCATACACATGGCCATCAAAGACATCAAGGTGGTTTTCACAACCCACTTGATCTATAATTATATTATAAACAT10.78125No Hit
ACCCAGCTCACCGACTCCTCACCATCCCCCACCAGCACCAATGTCTTAACGCTGAGCCTCTTCAACAACCAGA10.78125No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.78125No Hit
CTCTTATGAACACAATCCAACATAAACATCAAACACAAATGACAGAAACAAGACAAACAAACCACATTACCCA10.78125No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.78125No Hit
TCCCTCTAGAGGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCACCTCTTGCTCAGCCTATATACCG10.78125No Hit
AGATTTGTGTACCATTTGTCTGACCTCTGTAAAAAATGTGATCCTACAGA10.78125No Hit
AATAAATAACAACCAATTACATCTCCACAGATATCCCTACATCCATTACA10.78125No Hit
GATTTAAATCTTTCCCAGACCCCATGCAACTCAATCCGACAGGGACCCCG10.78125No Hit
CTATCATAGTGTTGGCAGTAATAACTTGCAAAATCATCAGGCTGCAGGCTGCTGATGGTGAGAGTGAATTCTGTC10.78125No Hit
CTACTACCACATAGACGTATGTCCCAAATGGAAAAAGGAACACATCACCTAAGAATCCACGACCACACACAAGGA10.78125No Hit
CCGCTATGCTGAGGGGTTTGAGGCTCGAGTTGAGAAGAAG10.78125No Hit
GTAAAATACATGGTGAGTCTTCTATCACCATCGTGGTATAAGTTTTGGTGATCATTCAAGAAAGAAGGTTTTCAT10.78125No Hit
GCCCCAACAACTACCCCCACAGCAAATCCATCACCAAGCAATATGATAACGAGCTCATCACCAACCAGGTCCAG10.78125No Hit
TAGATATAGAACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTT10.78125No Hit
GTTTAAAGGGGGAGGAGGGTGTTTTGTGTTGGTGGTTTTTTTGTTGTTT10.78125No Hit
CTGAAGCACACCTCTGCAAAAATCGACAGATGCAAAAGTATGAGACTCCCTCATACTTGAACTTACAAGAAGCT10.78125No Hit
CACCTTAAGAATCAGATCAACCCAGACTGAGGAAATATCCACGTGCACAACCCCATTGCCATCGACAAGGAGT10.78125No Hit
GAGTACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACG10.78125No Hit
GGGGAGAAGAGTGCGCAGGTCAGAGGGCGGCGCGCAGCGGCGCTCCGCGA10.78125No Hit
GAGTAATTTTTATAATTTTAATTTATT10.78125No Hit
GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCC10.78125No Hit
ATCAACCACCTGACCCCCCCTTAGTAGGAGATCCCCCACAACGAGCACATCACCCACACGACACTGGCACGTCC10.78125No Hit
CTTACACCATGAAACTCACAATCAGGAGTGGACACAAATCCCTCTAACACTCACCCCAATCAAAATCAAAAAAA10.78125No Hit
ACACAGGACGCATCTCGAACGCAGGTCACTGACCAAGTGAGGTTCGCTTCTCAAGCTAAGAG10.78125No Hit
GATTTGCACGTCAGGACCGCTACGGACCTCCACCAGAGTTTCCTCTGGCT10.78125No Hit
CCCATGAACACAGCGAACACCCTCATCAAAATGCATTAACCAAACTGACACTCACCACATACTCTGCATATATAA10.78125No Hit
AATACACTCAGACAACCATAATAAGAGACAAAACAGATGAATAAAAAAAGGGAGACACCATCACCACCAACGTTG10.78125No Hit
GGCCTAGACGTAGTGATGCTCGTTGTCTGCGTAGCTCATCGTCAGTGTGG10.78125No Hit
TATATGGTGTGCTCACACGATAAACCCTAGGAAGCCAATTGATATCATAG10.78125No Hit
GGTATCAACGCAGAGTACGGAGCCGGCAAGTCCGTGACATGCCACGTGAA10.78125No Hit
GTGTGAAGGCCAGCGGCAGGGCCTCGTGGCCCACCATGCAGGAGAAGGTGTCCCCCTTCTTCCAGTCCTCGGCTG10.78125No Hit
GGGTTTGACTGGATGGCGCTAATATAAAAACAAGGGAGTATAAAAGACTACAAAGACTCAGTCAAGGAACGATT10.78125No Hit
TATATAAACAAACTAGACAAACAATACAAAAAAAAAAGCAAATTAAGAGC10.78125No Hit
AACAAAAAAAGTGTAAAAAAAAAAATACTCACACACAGCAACAACTGAATCATATACACAAATTACCCTCAAA10.78125No Hit
GCCACACAGTGCCCAGACGGCAAGTCCGTGACATGCCACGTGAAGCACTACACGAATCCCAGCCAGGATGTGA10.78125No Hit
CTGGGGTGCTGGCTGACAGGCTTCAGCACCTCGGTGGGGTGGGTGTAGAA10.78125No Hit
GTAATCAACGAACATAACTGGTTACAACAGGACCAAGAACCCCAATACCCCATGTAACTTAACCAAATCTAAAG10.78125No Hit
CAGATGCAGACCGACAGCTACAGATATCACTCTCACCATCATCAGCCAGCAGGCTGAAGATTTGCCAGTATATTA10.78125No Hit
CTAAAACTCTGTCTCCGCCCCCGCTTCCCCACGACATGGACGTAAGCGCCGACCTCGAGATTGCCCCCCGCCCCG10.78125No Hit
GAAACAAAACAGACCAAACCTACCAAAATAAATTGTACCTAAAGTAGGTC10.78125No Hit
ATCACACACTTTGAATAATCAATCGACATCTTACTATGAATCACATTGAT10.78125No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.78125No Hit
ACTTAAAACCCATGAACCTTCAGCTGATCGTCCTTAGCCAGTCCAATCTCTACGAGGAACTGGCATATGTTCTTG10.78125No Hit
GACAAACACATACAAATAATAATAATAATTCCAACCCACAACCCCCCCTT10.78125No Hit
ACTTAGAGTATGAACATATAATTAAGAAGTGATTACCTAATAAAGATAAC10.78125No Hit
GATAAAATGAAATTAGAGAATGTGTATATTATAAACCTCCGACAACAGGA10.78125No Hit
CACATGCCCTACCCCAATAACAAACAGGAATATAATTACAACAGAACACT10.78125No Hit
CTAAGTGAATTTTATGCCGCTCACGCCCTGTCCGCATTCTATCCAGCTCACAATTATGTCTAAAAAACACA10.78125No Hit
GGTATCAACGCAGAGTACGGGAGCTCTGAGAGCGGAGCCCCAGCCCCAGA10.78125No Hit
CAGCATCCCCGACCAGCCCCAATGTCTTCCCTCTGAGCCTCGACAGCACCCCCCAATATTGGAACCTGATCATCG10.78125No Hit
GACTCAGACCCACTGCCGCTGCACATTGATGGGACCACACATTCTAAAGT10.78125No Hit
GTATAAAACACTCTGGCTGGACTTGCAGTAGATGGTGGCCCTCTCCCCCAGAGACACAGCCAGGGAGT10.78125No Hit
ATTCCATTCTATATCTATAAATTCAATTCGATACCATTTCTTTTGAGTCT10.78125No Hit
GGCGTATACATTGTGTTTCTCGTAGTCAGCTTTGCTCAGCGTCAGGGTGA10.78125No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTGTTTGTT10.78125No Hit
GGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCTGTAGTGCG10.78125No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.78125No Hit
GAGTAGTATAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCA10.78125No Hit
AAAAAAGAATAATACTTAAATTATTTATTAAATTATATTAATTTATTACGAAAATAATAATGATTAAATTGTAGA10.78125No Hit
CTACCAGGAGAGTGTCACAGAGCACGACAGCAAGGACACCACCTACAGCCTCAGCAGCACCCTGAAGCTGAGCAA10.78125No Hit
ACTTCCATCATGCCATATATCTGCCACCCACTCCAGCCCCTTGCCTGGAG10.78125No Hit
GGTATAAAATAACCATATAAAAACGGTAAACTCCAACACAAATACACACC10.78125No Hit
ATCCAACAGACGCCAAACTACATTCCAAGGTAGATAAAGCACTCAAATAGGATAACTCCAATCACAATGTAACAT10.78125No Hit
CCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGT10.78125No Hit
AAATACCACATGTACCTCTGCCGCAAAGGGACCACGTTAACATAAACCTCATCATCCACTACAAGCACCAAGGT10.78125No Hit
TCCTAACACTCCCAATTAATCTTTCCATTTTCGTCTGCGTTTAGTAAATG10.78125No Hit
ACATGGCGGCGCCCAGCGGAGGGTGGAACGGCGTCGGCGCGAGCTTGTGGGCCGCGCTGCTCCTAGGGGC10.78125No Hit
GCCATATACAAGCAACACCTGACCCATACCACTGTACCACCTACAGAGTGTACAGAGAACTTCCTGGCACACCA10.78125No Hit
GATCAAAAGCAAACATAACCAGCACACATACAACCCAGACAGAAACCTCA10.78125No Hit
TCCTTGGCTACTTAACCAGCGCAAAGCGAAGACAGTGGCACAGACTGCATGTAAATAGCCTACAAAAGC10.78125No Hit
TCTGGGCACTGTGTGGCCGGCAGGGTCAGCTGGCTGCTCGTGGTGTACAGGTCCCCGGAGGCATCCTGGCTAGGT10.78125No Hit
CTCTAGGTGCTGTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGATTTACCCGATTGGAGGGCGTTAT10.78125No Hit
CGTATCAACGAAGACTACCGCGTTGCCAGAATGACTGATAAGGCGTATCAAGAGTAAAGGCAGATTCTGTAAT10.78125No Hit
GACAAACAACACTCTAAAAGAAACCATCTAAAAAAACCGAAACACAATCCAACCCAATGACCACATTCTCAACAC10.78125No Hit
GGACAGAACGTGACCGCCAGAAACTTCCCACCTAGCCAGGATGCCTCCGGGGACCTGTACACCACGAGCAGCCAG10.78125No Hit
TATTAATACATAATCATCAAACAAAATAAGATTTAAATCCAACTAGGACCCCTGGCCAAAAGTGAAGAAAGAA10.78125No Hit
GTATCAACGCAGAGTACGGGTCAGCAGCACCCTGACGCTGAGCAAAGCAGACCACGAGAAACACAAACTCTACGC10.78125No Hit
CCCTTACTTCGAAGTCTTAGCCGTTTAACACGCTCCATCTCCCTAATCAAACCCACATAACCCCTAACCATTTGT10.78125No Hit
AATCAGGCAAGTCAGTGTAAACTAGAGGATCTCATCTTAACCAAAGAACATGTACTCGAAAGCCAGTAAGAGAAA10.78125No Hit
GTTTTGGGGAAAGCCAGTGGCCATGCCATGAGGACACTCGAACATCTATG10.78125No Hit
GTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTC10.78125No Hit
GGATTGCGCTGTTATCCCTAGGGTAACTTGTTCCGTTGGTCAAGTTATTG10.78125No Hit
CCCCACCAAACATAAATAAGGGAGAAAATAGTACAAACTACATAAGGTGC10.78125No Hit
AATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTAATTTATAAACAATTAAAAAGAAAAATTGAAGAAAATAAAA10.78125No Hit
GAATTGATTTCGCGGGAGCCGGTGACCGACGTGCTGTAGACGCGAACGCC10.78125No Hit
CTGTAGCACTGTCTTCATCACAGATATTGCTCTGGGTAGCAGTAACTATC10.78125No Hit
GGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCAGTCCCCAGCTGGG10.78125No Hit
GAACATTAATTAATTTTTTTATTAAATTTTATAATATG10.78125No Hit
ACACAAAACAAATTGTATTCAAAATATAAAAACAAATAAGTTGATAAACCATTATTTAAATGATAACTCATT10.78125No Hit
CCAATCAATTAAATACAAAGACAGTATCACAGAGAAGAACAGAAATCACAACAACTACAGCCT10.78125No Hit
GTCCTCGGTTGTCAGGCTGTTCATTTGCAGATAAAGTGTATTTTTTGAAT10.78125No Hit
GATGAGACTCTGCCCAAACAACTTCCCTCAACAAAAACTACCACAACTCCATAAACACAAAAACCCCCAAATCCA10.78125No Hit
CACAAAAACACCCAAGACACCACACAAATAAAGATGTTAATTTTAACAAA10.78125No Hit
ATATTATAGTGCTCCGTGTACGTTCCGCCAAGTGACCAAGGTGGAAATCAAACGAACTGTGGCTTCACCAT10.78125No Hit
CTCTGGGACAAACAACACTATCAACATCAGCAGACTGGAGCATGAAGACT10.78125No Hit
AAAGGATGGGAGGCGCTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTT10.78125No Hit
CAGTAGCTGCGGAGGCAGCCATGGTAGGGGCGCTGTGCGTCTGCTCGTTC10.78125No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGAGTATAAACAACAAGCAGGCAACAAA10.78125No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT10.78125No Hit
CTTCTCCCTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCCCTGATGGGTGACTTCGCA10.78125No Hit
ACATACACACAGAAGACCAACCACCACTATGCCGATAAACCCACCCATCA10.78125No Hit
GTATCAACGCAGAGTACGGGATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTTTGGTT10.78125No Hit
GCAATGGCAAAAACAAATACACTGTGACCACCAAAAACCACCACTCACACAAGAAAAGAAACAACATATAAAAAT10.78125No Hit
CAACCAACCACAACAAACTCAATATTCAAATACATCACCTTCAACTCAATCATCCTAAAAAAACACCAGCTCAAT10.78125No Hit
AGAAGTACCTGACTTGGGCATCCCGGCAGGAGCCCAGCCAGGGCACCACC10.78125No Hit
GAGGCAACTGAATACATCATCCATCAATCTTAATACCAAATAAAATATGG10.78125No Hit
GATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCTGGACTGGTGAAGCCTTCGGAGACACTGTCCCTCA10.78125No Hit
ATCGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTATTGTTGATAT10.78125No Hit
ACAGGAGTACGGGGTCTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTA10.78125No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAGATGGGAGATTTTTTGT10.78125No Hit
GTAATATACGGCAGTGTCCTCGGCTCTCAGGCTGTTCATTTGAAGATACAGCGTGTTCTTGGAATTGTCTCTGGA10.78125No Hit
GAGTACTTTTTTTTTTTTTTTTATTTTTTGTTGAATATAAAAAAGACGAGCGCCACCAAAAAAAA10.78125No Hit
CAGGTGAGATAAGAGTCTCATCACGATGAACCCGAAGCCAACACAGATCCACACCAACAGACAAAAGAAGACAT10.78125No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCAAGGA50.0127.062
AACGATT50.0127.068
GTCAAGG50.0127.061
GAACGAT50.0127.067
AGGAACG50.0127.065
AAGGAAC50.0127.064
CAAGGAA50.0127.063
GGAACGA50.0127.066
AGTCAAG50.0127.060