FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004684587

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684587
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences949654
Sequences flagged as poor quality0
Sequence length20-76
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT30940.32580287136156955No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC26430.27831189043588506No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG25140.26472799567000194No Hit
GTTGGGGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAAGATTGGCAAATATTTAAATTGGTATCAGCAGAAA21490.2262929445882395No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC20750.21850063286207397No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC20510.21597339662656084No Hit
GTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGG20320.21397266794011294No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC16830.17722244101535928No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT16790.17680123497610709No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG15830.1666922900340545No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA15800.16637638550461537No Hit
GTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAG14450.15216068167985392No Hit
GTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTT14270.15026525450321906No Hit
GCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGG14070.1481592243069581No Hit
GTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGC13960.14700090769901458No Hit
GCGTCAGGGTGCTGCTGAGGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCT13890.14626379713032325No Hit
GGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAG13470.14184113371817525No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG13300.14005100805135345No Hit
GAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCT13070.13762907332565336No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT12680.1335223144429445No Hit
GTGCAGCCACAGTTCGTTTGATTTCCACCTTGGTCCCTTGGCCGAACATC12100.12741482687378772No Hit
ACTTACTACTGTCAACACTATTTCAGGGCCCTCGGGATGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAA12100.12741482687378772No Hit
GTAATATATGGCCGTGTCCGCGGCCGTCACAGAAGTCAGCTTAAGGGAGAACTGATTCTGGGACGTGTCGATTGA12040.12678301781490944No Hit
CAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCGAGGTGCCAGATGTGACGT11760.12383457554014408No Hit
CCCCTAAACTCCTGATCTCTTATGCAACCGATTTGCAAGGTGGGGTCCCA11610.12225505289294837No Hit
GATGAAGACAGATGGTGCAGCCACAGTTCGTTTGATTTCCACCTTGGTCCCTTGGCCGAACATCCCGAGGGCC11510.12120203779481792No Hit
CCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGATTTCAACTG11280.11878010306911779No Hit
GGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCT11280.11878010306911779No Hit
GGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCA11240.1183588970298656No Hit
GTCTGCATCTGTTGGGGACAGAGTCACCATCACTTGCCGGGCAAGTCAGA11020.11604226381397857No Hit
GTAGTAAGTTGCAAAATCTTCAGGTTGAAGAGCGTTGATGGCGAGAGTGA10790.11362032908827847No Hit
GATTTCACTCTCGCCATCAACGCTCTTCAACCTGAAGATTTTGCAACTTACTACTGTCAACACTATTTCAGGGCC10560.11119839436257836No Hit
GTGGGGTCCCATCTAGGATTACTGGCAGTGGATCTGGGACAGATTTCACT10440.10993477624482179No Hit
ATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCG10050.10582801736211293No Hit
GTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTG9910.10435379622473026No Hit
ATCTAGGATTACTGGCAGTGGATCTGGGACAGATTTCACTCTCGCCATCA9870.10393259018547807No Hit
ATTTCAGGGCCCTCGGGATGTTCGGCCAAGGGACCAAGGTGGAAATCAAA9830.10351138414622589No Hit
GTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTA9810.10330078112659981No Hit
GGCCCTGATGGGTGACTTCGCAGGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGCTG9770.10287957508734762No Hit
GTTTAGGGGCTTCCCCTGGTTTCTGCTGATACCAATTTAAATATTTGCCA9700.10214246451865627No Hit
CCCTGACGCTGAGCAAAGCAGACTACGAGAAACACAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCT9510.10014173583220837No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)