FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004684637

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684637
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106
Sequences flagged as poor quality0
Sequence length29-76
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21.8867924528301887No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTCCCTACTTAAGGAACAAGTGATTATG10.9433962264150944No Hit
GAGTACGGGTATAAAGGAAGATGGAAGTGAGAAATCCTATGCAGAGTCTG10.9433962264150944No Hit
GTCGCGGCACCATGGCTCATCAACGGCGAGCCATCGGAATACCACATGAGATCGTGATCTGCCTCTGTGGTATG10.9433962264150944No Hit
ATCTGGAACTGCCTCTGTTTTGTGCCTGCTGAATAACTTCTATCCCAGAG10.9433962264150944No Hit
GTTAAGGGCCAGCTCCTCCGACGGCGGCGGCAGCAGGTGGACCTCGGGCC10.9433962264150944No Hit
CAGCATACACATCATGGACCCCGATCACATCAAGAAGCTCCTCCACATCTCCATCAAAGTTGCCAAATCTGACAT10.9433962264150944No Hit
GTATCAAAGAAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGG10.9433962264150944No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAAATGTTAGAGTTTATTTTT10.9433962264150944No Hit
CAAACCATACCCAGAACAAAGCACACTACTAGAAACACAAAGTAAACGACAACAAATTAAACAAAAATGACATTA10.9433962264150944No Hit
ACTGTCTCCTCAGCATCCCCGACCAGCCCCAAGGTCTTCCCGCTGAGCCTCTGCAGCACCCAGCCAGATGGGAA10.9433962264150944No Hit
GATTTTACACTGAGAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACT10.9433962264150944No Hit
GCTCTACAAACTCCTCGTACGTTCGGCCAAGGACCAAGGTGGAAATCAAA10.9433962264150944No Hit
GACTATATTTGAGAAAGAGCACCCCAAGCTAATTAATGATTTTTACAAGAGAAGGTCATTCTCAATCTTA10.9433962264150944No Hit
GCCGAGGACTGGAAGAAGGGGGACACCATCTCCTGCATGGTGGGCCACGAGGCCCTGACGCTGGCCTTCACACAG10.9433962264150944No Hit
ACTGTGGATGCACCAGAAAATATCTTAGTTGTGGACTCTGAATTCAAAGT10.9433962264150944No Hit
TCCCCGGCTGGGGCTCCGCTGATGGTCAGGGCGGCCGTGTGCCCCGAGTTGGAGCCAGAGAATCGCTCAGGGATC10.9433962264150944No Hit
CATCTGAACATGACCCCGAAGGAAACCTTGAAGATATCGAAGTTACACGAATACAAAAACAAAAAACTTTCGCTC10.9433962264150944No Hit
GGTGGTGAGGGTTGAGAAACTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCATGCGTGA10.9433962264150944No Hit
CAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAACTCCTGATCTATTTGAGTTCTATCCGGGC10.9433962264150944No Hit
GTTAATTAGCAACTTAGGAGGCTGTCCTGGTGTCTGCTGCAAACAAGCTAATTAATTCTTACAGTCGGAGT10.9433962264150944No Hit
ACCTTGGGGCTGGTCGGGGATGCTGAGGAGACGGTGACCGTGGTCCCTTG10.9433962264150944No Hit
GTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACGCCTGGAGAGCCGGC10.9433962264150944No Hit
CCTGAAAGAGGTATGATCTATTAGGAATACAGTTTCTAGCATTAAAAAAA10.9433962264150944No Hit
CATTAGCTGCCCCGCGAGAAGAAACTGACTTGCCCATCAAGGAAGGAGCCAAGCACCGTCACCACCACATT10.9433962264150944No Hit
ACACCCGTCACCTAGCCAATCAGGAAGATCATTTTCACAGACAGTGTGTTCTTCTAATTAACTCTCGAGATCTT10.9433962264150944No Hit
CCTGTGAAGGCCTCGGACACCGGCATCTATTACTGTGCGAGACTTAGGGG10.9433962264150944No Hit
GGAAAAGAGAGACCCACGGCGCACCCTTGCGCTAACCGAGGACCGTCAGATTGGTCCCGCCGCAGAAATTGAAA10.9433962264150944No Hit
CTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAAT10.9433962264150944No Hit
CTGCAACCAGAGACCCAGAGCATTAGCAGCCCCAGGAGCTGAGCAGGGAG10.9433962264150944No Hit
GTCCTGAACTCTCTCCCAGAAACCTGGTTCTGGTGGCCACCAAGATGCCC10.9433962264150944No Hit
TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.9433962264150944No Hit
GAGCTTCAACAGGGGAGAGTGTTAGAGGGAGAAGTCGACCCCCATCCTCC10.9433962264150944No Hit
ACAAAAGAACAGCTAAAAGAGCACACCCCACTAAGTAGAAAAAAACAAGCAAAATAAAAAGCTAGACGCGACAAA10.9433962264150944No Hit
GCCTCATCCCCGGCTTGGGCTCTAGTGATGGTCAGGGTCGCCATATTCCCCGAGTTGGAGCCAGAGAAT10.9433962264150944No Hit
GACAACAGACACATTCACAAAACACGTATTACCCGCCAAGCGATACAACC10.9433962264150944No Hit
TTTCTCAGGGGTGCTGCAGTTCACTGAGGAGCAGAGTGTGGAAGTTACAG10.9433962264150944No Hit
GTCATCGCCTGCCTGGTCCAGGGCTTCTTCCCCCAGGAGCCACTCAGTGT10.9433962264150944No Hit
GTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGTAACTGAGGAGCAGGTGGGGGCACTTCTCC10.9433962264150944No Hit
GTACGTATTCTCTAGCACAGTCTGAGCAATTAAATAGATTAATAAGCAAA10.9433962264150944No Hit
ATCACCCCCTGTATGCCACACACAACCCACACTTCAAATCCGTCACATTCAAAGAAAATCACAACACCAATCACA10.9433962264150944No Hit
GCAGTGGAGGGGGCAGGACCTCCTGCTGGTGCAGCACCAGCTGCTGGAGC10.9433962264150944No Hit
ATTCATTAGTGATAAAGATGCCTCTATAGTAGGTTTTTTCGATGATTCAT10.9433962264150944No Hit
CAACTGAAGCATCCAAAAAAGACTATATAAAATAAAACTTAAGACTGCAA10.9433962264150944No Hit
ACAGAAACAGGTATAGCTCAAACATGAAATGGAGGACAGAAAAACTCGTAGGTCCACTATCTTATAAACATCTGA10.9433962264150944No Hit
ATGCAGGAGAAGGTGTCCCCCTTCTTCCAGTCCTCGGCTGCCACGCGCAG10.9433962264150944No Hit
CAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACG10.9433962264150944No Hit
GTACATCCTTGGACTTGGAAGATTTCATTCCAGATTCCAGATGTGGGATCATAGATCTCAGGTATGCTTTCATAT10.9433962264150944No Hit
CTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCT10.9433962264150944No Hit
ACACGAATCCCACCCATCATCTGACTCTGCCAACCACACCTACCCCAACCCCAACAAACACCACCACCCCC10.9433962264150944No Hit
CCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCT10.9433962264150944No Hit
GAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTA10.9433962264150944No Hit
GGCTTGGTCGTTCATGGGGGAGAAAAGCTTCAAGTTACAGTTACACCACA10.9433962264150944No Hit
GGTCTAGTCAGAGCCTACTGTCTTGAAATGGATACAACTATTAGGATTGGTACCTGCAGAAGCCAGGGCAGTCTC10.9433962264150944No Hit
GTATAGTAGTTCGCTTTGACTGGTGAAGTCTTAGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCC10.9433962264150944No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG10.9433962264150944No Hit
GACCCCGGATTGCCGGGTAGATGCCCAGTTAATGAGCAACTTAGGAGGCTGTCCTGGTTTCTGCTGGAACCAAG10.9433962264150944No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT10.9433962264150944No Hit
GGGTGCTGCTGAGGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCTGTGACA10.9433962264150944No Hit
CAACTGCTCATCAGATGGCGGGAAGATGAAGACAGATGGTGCAGCCACAGTTCGTTTGATATCCACCTTGCTCC10.9433962264150944No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT10.9433962264150944No Hit
ATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAG10.9433962264150944No Hit
CAGACCCGACGAATCACGAACCAAATAGGCCTCCGCAGGGGATTGCTAGT10.9433962264150944No Hit
CTAAAAACCCACAGAACCTGAAAACCCACTACCCAGTCTATAAAACACATCTCACCCTAACAAAAAAAAAAAAA10.9433962264150944No Hit
CACCACATTTACGTGAACCTGCAGGATTCTGGTGCACGCCTTGACAAACC10.9433962264150944No Hit
GAATCAACGCAGAGGAATTTTTGTTATTTTGTTTTTGTTGTATTTATGT10.9433962264150944No Hit
GGATCGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGAACTTCTCCCTCTAACACTCTCCCCTGTTGAAG10.9433962264150944No Hit
CTGCTTTGCTCAGCGTCAGGGTGCTGCTGAGGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCTGTGACACTCTC10.9433962264150944No Hit
GTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCCCTGATGGGTGACTTCGC10.9433962264150944No Hit
TCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCT10.9433962264150944No Hit
CAAATACTCCTAACACCATGACTGCATAAGTAAGAGACAAACTCACAATC10.9433962264150944No Hit
GCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGTTGCAGTGGGGAAATAGTGATGACTCAGTCTCCACTCTCC10.9433962264150944No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTGTTTATAAATGAATAAATAGGGTGAGGGTAAACAGGATACACTCGGC10.9433962264150944No Hit
AACTCAAATAGATCAGGAGTTGTGGAGACTGCCCTGGCTTCTGCAGGTACCAATCCAAATAGTTGTATCCATTTC10.9433962264150944No Hit
ATCCCACTACTGATCAGCACGGGAGTTTTGACCTGCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCA10.9433962264150944No Hit
GCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGG10.9433962264150944No Hit
GTAACACCTAGGGCCTGCTCGGGGATGCGGAATAGACGGTTACCATTCTCCCTTGCCCCAAGATAAAAGAAGGAT10.9433962264150944No Hit
CACAATCTGTATCTCCAAATCAACATTAAACAGAATCACTCTGATGAAGACGCTTAATGTGCTATAATTGCTGTC10.9433962264150944No Hit
ACTTTACTCCGCCAAAACTGAGTTGCAGCTCTGTAATCAAAGCTGAAGTCCACACTGTAGTAGACGACCACCAG10.9433962264150944No Hit
TTCAGTGGCAGCTGGTCTGGGACAGATTTCACTCTCAACATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTAT10.9433962264150944No Hit
GGCAGCAGGTGGACATCGGGCCGGAATGTGTTTCCGGATTTTGTGATGTTGGCGATTAGTGGGGTCTTCAACT10.9433962264150944No Hit
CAGGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGG10.9433962264150944No Hit
GAACCATGGGGAGACCTTCACCTGCACTGCTGCCCACCCCGAGTTGAAGA10.9433962264150944No Hit
GAGCAGGACAGCAAGGACAGCACCTACAG10.9433962264150944No Hit
GTCTAAGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA10.9433962264150944No Hit
AGGTCACACTGAGTGGCTCCTGGGGGAAGAAGCCCTGGACCAGGCATGCG10.9433962264150944No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGAGTCACGGTGC10.9433962264150944No Hit
GCCCTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAGGAAGCTAAGGCTGCGTTGGCCTGAGGCCCTCA10.9433962264150944No Hit
GGTGGACCTCGGGCCGGAATGTGTTTCCGGATTTTGTGATGTTGGCGGTTAGTGGGGTCTTCAACTCGGGGTGGG10.9433962264150944No Hit
GCTAGGCACTGTGTGGCCGGCAGGGTCAGCTGGCTGCTCGTGGTGTACAGGTCCCCGGAGGCATCCTGGCTGGGT10.9433962264150944No Hit
CATAATCACCACTCACGCTCCAGACTCAAAAATTCTTTATATAAAACGAA10.9433962264150944No Hit
GTTCAGTGGCAGTGGGTCAGGCACAGATTTTACACTGAGAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTA10.9433962264150944No Hit
CTTCACGGGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTCC10.9433962264150944No Hit
ACAGGGGAGAGTGTTAGAGGGAGAAGTGCCCC10.9433962264150944No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC10.9433962264150944No Hit
GGGGACGGTGGCCGCGCGGGGAGAGAAGGTCTGCGGCGGGGACGGGACCGAGGCGGGGCGGGGGTGGCCCGG10.9433962264150944No Hit
CCTTCGCTGTGACCAGCATACTGCGCGTGGCAGCCGAGGACTGGAAGAAG10.9433962264150944No Hit
GCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTT10.9433962264150944No Hit
GTCCCTGACAGGTTCAGTGGCAGTGGGTCAGGCACAGATTTTACACTGAG10.9433962264150944No Hit
GTGTAGCACCCATTTAAATTACATGGATCCCATCTGTGACTTCCTCTATCACATGAAGTATATGTTTACTGGTGA10.9433962264150944No Hit
CTAATTTAAAATTATTTTTTTTTTTTTATTTTAT10.9433962264150944No Hit
GAGTTTGTAGAGCTTGCATGCAGTAATAAACCCCAACATCCTCAGCCTCCACCCTGCTGATTCTCAGTGTAAAAT10.9433962264150944No Hit
GCTTTGCTCAGCGTCAGGGTGCTGCTGAGGCTGTAGGTGCTGTCCTTGCT10.9433962264150944No Hit
GGTCAAAAATGAGCTCGACTACCGCAAAAGGAGAACCAACACTCTGAAAAAAGCATCATACGCCAAA10.9433962264150944No Hit
ATCCAGGCAAACACAAACTACAAAAAAAACAGCAAACTTACCATCACAAC10.9433962264150944No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTGCT50.0133.066
CTTGCTC50.0133.067
TTGCTCC50.0133.068