EGAF00004684719 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004684719
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	433412
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3388	0.7817042444602365	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	687	0.15850968593393813	No Hit
GAGTTTATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGT	674	0.15551023045047208	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	661	0.152510774967006	No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA	661	0.152510774967006	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	659	0.152049320277242	No Hit
GCTCAGTAGCAGGTGCCGTCCACCTCCGCCATGACAACAGACACATTGAC	640	0.14766550072448384	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	588	0.13566767879061953	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	581	0.13405258737644551	No Hit
ATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGTCCACCT	556	0.12828440375439537	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG	526	0.12136258340793517	No Hit
CCCTGACGCTGAGCAAAGCAGACTACGAGAAACACAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCT	518	0.11951676464887913	No Hit
GAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCT	512	0.11813240057958709	No Hit
GTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTT	447	0.1031351231622567	No Hit
GTACCTGACTTGGGCATCCCGGCAGGAGCCCAGCCAGGGCACCACCACCT	439	0.10128930440320065	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	437	0.10082784971343665	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1145	0.0	42.550217	1
ACAGGTA	55	1.9056824E-7	42.470734	1
GTGTAAT	40	6.081711E-5	41.712326	1
GTATCAA	2955	0.0	40.201935	1
GTGGTAT	315	0.0	34.9589	1
AATCGTT	70	9.869018E-7	34.43143	39
TATCAAC	3470	0.0	34.10769	2
TGGTATC	335	0.0	33.836662	2
TCGCATT	40	0.0030478016	33.385284	18
AACGCAG	3585	0.0	32.64536	6
ATCGTTG	75	1.6178456E-6	32.320847	40
AGAGTAC	3655	0.0	32.293816	11
CGCAGAG	3670	0.0	32.070972	8
TTAATCG	75	1.7920702E-6	31.90035	37
ATCAACG	3710	0.0	31.811398	3
GCAGAGT	3700	0.0	31.810938	9
TCAACGC	3710	0.0	31.721535	4
CAGAGTA	3720	0.0	31.639912	10
ACGCAGA	3780	0.0	31.225899	7
CAACGCA	3775	0.0	31.08702	5