FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004684803

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004684803
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87
Sequences flagged as poor quality0
Sequence length47-76
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTT22.2988505747126435No Hit
CTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCG22.2988505747126435No Hit
GGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCAGCTGCGTTGTGTCTGG22.2988505747126435No Hit
GACCGTGGGCATGCCCAACAAGATGTTCCAGATCGACGCCGACGCGGGGTTCTTCAACACCGGAACGAAGATCGA22.2988505747126435No Hit
GTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGGGCAGGCGGTGCCTC11.1494252873563218No Hit
AATCTGACCCTGCCCGCGATCCACATAAAAGAGAAGACGCGCGACTAGGAGAGAGCACTGCACGCCACGAGGGCG11.1494252873563218No Hit
GCCGTATATTACTGTACGAAAGGGGCCCCGGGTAGCAGTGGCTGGGAGG11.1494252873563218No Hit
GAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTT11.1494252873563218No Hit
CACTTGGCACGTTTCATTCATTTATTCATTAAACAAATAATTACGAAACATCTTTTTTTTTTTTTAGACGGAGT11.1494252873563218No Hit
GGGGTGGGGACATGCGGGCGGCTCAGTAGCAGGTGCCGTCCAACTACGCCAATACAACAGACACAATGACATGG11.1494252873563218No Hit
GTCCAAGGACCAGTTCTCCCTGAAGTTGAGCTCTGTGAACGCCGCGGACTCGGCTGTGTATTTCTGTGCGAGAGG11.1494252873563218No Hit
GTGTTAATAGCAACTACATAGCCTGGTACCAGCAGAAACCTGGCCAGGGTCCCAGGCTCCTCATCTATGGTACAT11.1494252873563218No Hit
GGTGAGACCAAAATGGTGGAAACAGCCTTAACCCCAGATGCCTGCTATCCTGACTAATTTAAGTCATTGCTGA11.1494252873563218No Hit
CCCGGGTAGAAGTCACTTATGAGACACACCAGTGTGGCCTTGTTGGCTTG11.1494252873563218No Hit
CAATTGAACAATGGGTAGACATGAGACAGAAATGATGGACAACCCGAGTTTAAGACCCACCTAACCGC11.1494252873563218No Hit
CTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCA11.1494252873563218No Hit
CTCAGTTGGTGTCTCATTAATCTTTCCTTGTGGAAGCGCCTCAGCCAGATCATAATGGCAAAGATAGGATTTAGG11.1494252873563218No Hit
GCAGCAGGTGGCCCTCGGGCCGGAATGTGTTTCCGGATTTTGTGATGTTG11.1494252873563218No Hit
GATGACAGTGTTAAATTTGAAAAAGTATTAAATAGCGTAGTTGAACCTTAGACACATTTCCGTACTTCTCGCA11.1494252873563218No Hit
GTCCTGTCCCAGGTGCAGTTACAGCAGTGGGGCGCAGGACTGTTGAAGCC11.1494252873563218No Hit
CTCCTAAGGTGCTCATTTACTGGGCATCCACCCGGGAATTCGGGGTCCCT11.1494252873563218No Hit
GTCAAATACAAGGTCATCCCTTCATGAGACCACACACAGCACAACCAACTTAGCTAATACCACCATACTCATATA11.1494252873563218No Hit
CAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGTTAGTGG11.1494252873563218No Hit
GTGTAATAAAATGTTCCTCGCATTCCCCCCCGGGTTTTTTTTTTTTTTTG11.1494252873563218No Hit
ATAACACAACATCAACCCGCCATCGGAACACCAGTTTAAATCTGGCAAACCCTCGGATGTGTCCCTGCTGAA11.1494252873563218No Hit
GGCACGTTCGCAGTACCTGAGGTCGCTGTCAGAGCTGCATCGCTCCATCACTGATCTGGACCGCCTGCTTGGCGG11.1494252873563218No Hit
GTGGTGGACTCAGATGATCTCCCCTTGAATGTTTCCCGCGAGACTCTTCA11.1494252873563218No Hit
CAATACCTCTGATCCCACCTCACCATTGAGAAACAGATTTGTGTACCATTTGTCTGACCTCAGAAAAAAATGTGA11.1494252873563218No Hit
CCCTGGTCACCGACTCCTCAGCATCCCCGACCAGCCCCAAGGTCTTCCCA11.1494252873563218No Hit
CCTGGACGCCCTCAAGTGGGAAGAGCGCTGTTCAAGGACCACCTGAGCGTGACCTCTGTGGCTGCTACAGCGTG11.1494252873563218No Hit
ATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGAC11.1494252873563218No Hit
GCCCAAGTCAGGTACTTCTCGCGGGGCAGCTCCTGTGACCCCTGCAGCCA11.1494252873563218No Hit
CAATGGCTTTGGCCCCCAGCGCAGTAAGGCGGTGAGCCTCTCCATCACTGTCCCTGTGTCTCATCCTGTCCTCAC11.1494252873563218No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.1494252873563218No Hit
CCTGTGGCCTCACGCTGTGAAACTGGGACCAGTACTGTGCGTTGGGGGGTGTCCAGGAGCTGTGTGTTTGGTGGG11.1494252873563218No Hit
GCCTGGGAGCCTGGCCAGGGTTGTGCTGGTACCAGGCTAAGTAGCTGCTG11.1494252873563218No Hit
CTCCTGCGCCGGCTCCAGCCCCGGCGGCGGCGCCGGCAGCAGCCAGCACC11.1494252873563218No Hit
CAGAAAGAGCGGCACGCACAATAAACACTATAATCCTACCACTTTGCTGGACGCTGCGTCCACAACAAATCTCCT11.1494252873563218No Hit
CAGTGCCTCCTCCTGCTCCTCCAGGAAGCTTCTGCTGATTGAACGCAGGC11.1494252873563218No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT11.1494252873563218No Hit
GCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGTGATTTTACAAGGTGTT11.1494252873563218No Hit
GTATCAAAGAAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTG11.1494252873563218No Hit
CTATTGCGGTCCTCCAGCTCATCTTTCACCTCACCCCCCTCCTCCTC11.1494252873563218No Hit
CAAATACTCCAAACACGCACCAGACCAAAACCCTAATCAAGCTGACCCTG11.1494252873563218No Hit
TTTTACAGAGGTCAGACAAATGGTACACAAATCTGGTTCTCAATGGTGAG11.1494252873563218No Hit
CTTGCCGGCTAGGCACTGTGTGGCCGGCAGGGTCAGCTGGCTGCTCGTGG11.1494252873563218No Hit
GTCCAGGGCTTCTTCCCCCAGGAGCCACTCAGTGTGACCTGGAGCGAAAGCGGACAGGGCGTGACCGCCAGAAA11.1494252873563218No Hit
CAAAGTACCTTGGAACCAGATATCAAAAGAATCATAACCACTACCATCATAGTATACCTAACAGACCGATCA11.1494252873563218No Hit
CCTGCACTGTCTCTGGTGGCTCCATCAATACTTACTACTGGAGCTGGATC11.1494252873563218No Hit
TCCTTGAACAGGCACCGCGAAACCTACATGTAGAACTGAAGCAGCCCCTC11.1494252873563218No Hit
CCATGCAGGAGAAGGTGTCCCCCTTCTTCCAGTCCTCGGCTGCCACGCGC11.1494252873563218No Hit
GTAGTGCGCGGTACGCGGTCGCCGGGGAGGGACGCGTCCCCGGCGCGAGAGACAGGGGGAAGGGCGCCCT11.1494252873563218No Hit
GTATCAACGCAGAGTACGGGTCTGCCGGATAACACGGGAGTAGTGCTTAA11.1494252873563218No Hit
GGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTT11.1494252873563218No Hit
CTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGGGGGGGTGGGGGTTT11.1494252873563218No Hit
CAGGGTATCAACGCAGAGTACGGGAGCTACAACAGGCAGGCAGGGTCAGCAAGATGTTGTTGCAGACCCAGGT11.1494252873563218No Hit
GGCTGGATCCCGCTGGCGCACGAATCGCTGATGCGCGCCATCGAGCTGAA11.1494252873563218No Hit
GAGCACAAAGCATCCCAGGCCGTCATGAAGCAACTCACTAGCAAGAGGGGGCACAAAAACCTCAAAAACTCACAC11.1494252873563218No Hit
GCTTTTTGTTTCCTAGCTTGTCTTTTTTCTTCTGCTTCCTACTTTTCAGGTTTAAAT11.1494252873563218No Hit
CCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCT11.1494252873563218No Hit
GACAACAGACACATTGACATGGGTGGGTTTACCCGCCAAGCGGTCGATGG11.1494252873563218No Hit
CCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTACCTGAGCCT11.1494252873563218No Hit
CTCCTCGCTTCGTCCGGCCGCCCGGGCGCCCGCGTCCCAGCTCCGGGCGGACAGGTGCCGCGGTCGCTGCTCTTG11.1494252873563218No Hit
CAGTGTGACCTGGAGCGAAAGCGGACAGGGCGTGACCGCCAGAAACTTCCCACCCAGCCAGGATGCCTCCGGGGA11.1494252873563218No Hit
TTCGTGGAGGTGGCGAGCAACCTCTCGGGCGAATACAAGGACAAGGTCTGCTGCATCGTCGGCGCGCGCGGCGAA11.1494252873563218No Hit
GCCTAGAAGGAATAATACTATCGCTGTTCATTATAGCTACTCTCATAACC11.1494252873563218No Hit
AGCACATCCTTGGGGCTGAAGCCACGTGCCAGGCACGTCAGCGTCACCAG11.1494252873563218No Hit
CACCATAGATGAGGAGCCTGGGAGCCTGGCCAGGGTTGTGCTGGTACCAGGCTAAGTAGCTGCTGCTAACACT11.1494252873563218No Hit
AGGGAGAACTGGTCCTTGGACGGGTCTACTGATATGGTGACTAGACTCTTGAGTGACGGGTTGTAGCTGGTGATT11.1494252873563218No Hit
GTACGGGAGAGCTCTGGGGAGTCTGCACCATGGCTTGGACCCCACTCCTCTTCCTCACCCTCCTCCTCCACTGCA11.1494252873563218No Hit
CGCCCAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGCAGCCTGGGG11.1494252873563218No Hit
CTGTTGTTCAGAGGAACAATAATTCGGATGTTTCTCTCCACAATGTCCTC11.1494252873563218No Hit
CTTTCAGGTGAGCATGATAATTGGAAGATTTTGATACTTAGAGTATGAACATATAATTAAGAAGTGATTCCC11.1494252873563218No Hit
GTTCGTTTGATCTCCAGCTTGGTCCCCTGGCCAAAAGTGTAGGGTGAACT11.1494252873563218No Hit
ATCCTCAGCATCCCCGACCAGCCCCAAGGTCTTCCCGCTGAACCTCTGCAGCACCCAGCCAGATGGGAACGTGGT11.1494252873563218No Hit
CCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTA11.1494252873563218No Hit
GTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTA11.1494252873563218No Hit
TGTTGGAGGAGAATGAATAAATAAAGTGAATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
GGATAGCAGGCATCTGGGTTTAAGGCTGTATCCACCATTTTGGTCTCACCACCATAAACGAGAAGGACCACAAAT11.1494252873563218No Hit
GTTCCTCGGTGTGGCCTACGGAGCCACGCGCTACAATTACCTAAAACCTCGGGCAGAAGAGGAGAGGAGGATAG11.1494252873563218No Hit
GCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGAGGGGGATGCGTGC11.1494252873563218No Hit
GAGATGGACAATAAAAGCTATTAGTTCATGGTTTTGGCTGTTATAATAAG11.1494252873563218No Hit
GTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATTGGAGG11.1494252873563218No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)