FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004686252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004686252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1238874
Sequences flagged as poor quality0
Sequence length20-76
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67270.5429930727418607No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT30150.24336615345870524No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC29690.23965310435120923No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC26170.211240206832979No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC23300.18807400914055827No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA23190.1871861060931136No Hit
GAGTTACATTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCAT22080.178226357159808No Hit
GAGTTTATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGT20890.16862086055563358No Hit
GTCTGTATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGA20660.1667643360018856No Hit
GATCTATGGTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGAGGGTCTGAGACAGATTTCA20650.166683617543027No Hit
GTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGG19980.1612754807995002No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG19200.1549794410085287No Hit
GGGTAATGTAACTCTGTTGACAGTAGTAAGTTGCAACATCTTCAGGTTGTAGACTGCTGATGGTGAGAGTGAAAT18980.15320363491363934No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC18870.15231573186619463No Hit
GGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAG18800.15175070265418436No Hit
GTCTACAACCTGAAGATGTTGCAACTTACTACTGTCAACAGAGTTACATTACCCCTCGGACGTTCGGCCAAGGGA18260.1473919058758195No Hit
GTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAG18060.14577753669864732No Hit
GTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTT17260.1393200599899586No Hit
CCATAGATCAGGACCTTAGGGGCTTGCCCTGGTTTCTGCTGATACCAATT16610.13407336016414906No Hit
GCTCAGTAGCAGGTGCCGTCCACCTCCGCCATGACAACAGACACATTGAC16530.1334276124932802No Hit
GAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCT16330.13181324331610803No Hit
GCGTCAGGGTGCTGCTGAGGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCT15650.12632438811372262No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT15490.12503289277198487No Hit
CCTTAGGGGCTTGCCCTGGTTTCTGCTGATACCAATTTAAATAGGTGCTA15370.12406427126568159No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG15220.12285349438280245No Hit
ACATTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGA15140.12220774671193359No Hit
GTCCCCATCCTCCCTGTCTGTATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGACCATTAGCAC14940.1205933775347614No Hit
GTACCTGACTTGGGCATCCCGGCAGGAGCCCAGCCAGGGCACCACCACCT14240.1149430854146588No Hit
GTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGACCATTAGCACCTATTTAAATTGGTATCAGCAGAAA14060.11349015315520383No Hit
CCCTGACGCTGAGCAAAGCAGACTACGAGAAACACAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCT13820.11155291014259723No Hit
CCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAGAAACACAAAGTCTACGCCTGCGAAGTCA13720.11074572555401115No Hit
GGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCA13650.11018069634200088No Hit
ATGTAACTCTGTTGACAGTAGTAAGTTGCAACATCTTCAGGTTGTAGACTGCTGATGGTGAGAGTGAAAT13530.10921207483569759No Hit
ATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGTCCACCT13500.10896991945912174No Hit
CCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGATTTCAACTG13290.10727483182309096No Hit
GTGGATGCACCATAGATCAGGACCTTAGGGGCTTGCCCTGGTTTCTGCTG13040.10525687035162574No Hit
GTAGTAAGTTGCAACATCTTCAGGTTGTAGACTGCTGATGGTGAGAGTGAAATCTGTCTCAGACCCTCTGCCA12930.10436896730418106No Hit
GTCTGAGACAGATTTCACTCTCACCATCAGCAGTCTACAACCTGAAGATG12640.10202813199728139No Hit
GGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCT12390.10001017052581618No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)