FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004686296

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004686296
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128
Sequences flagged as poor quality0
Sequence length20-76
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG32.34375No Hit
CCGTTCGTGGGGCCGTGACTTTCCCCCTGAAGTCCAAAGTAAAGCAAGTT10.78125No Hit
GGTGAGGTGGGATCAGAGATATTCTCCCTGTTGTTCAGAGGAACAATAAT10.78125No Hit
ACTTAGGTTGATAGCTTATCTTTGCCTCCATATCACTGCTACCCTCTCTAGTGCTAATAGAAAAGGTTCAGAAAA10.78125No Hit
GAATGAAAGTGGCGCTTTCTCCGCCCCAGGGTTCCAGGACATAGTCTGAG10.78125No Hit
GCCATAGGGCAGACCCGAGAACCACAGGTGTACGCCAGCCCACATCGCGGGGGGAGATGACCTAGAAGCAGGAA10.78125No Hit
GTTGATTTCCACCTTGGTCCCTTGGCCGAACGTCCAAAGGGTACTGTAACTCTGGTGACAGTAGGAAGTTGCAA10.78125No Hit
GTTTAATGCTAGAAACTGTATTCCTAAGAGAGCATACCTCTTTCAGGTGA10.78125No Hit
CAGTCAAGCTGGCCAAGCACAAAGAGCTTGCTCCCTACGATGAGAACTGGTTCTACACGCGAGCTGCTTCCAC10.78125No Hit
GGGTGGGGGTGTTAGGCGGGGGGGCCGAGCTGAGGGGCGTGGGTGAGGCGGGGGCTGGGGGGGCGGTGGGGGGG10.78125No Hit
GCCTGGCTGTGCCCAGCCATGGAACCATGGGGAGACCTTCACCTGCACTGCTGCCCACCCCGAGTTGAAGACCCC10.78125No Hit
CACCAGTGTGGCCTTGTTGGCTTGAAGCTCCTCAGAGGAGGGCGGGAACA10.78125No Hit
CTACATAACACAAGATTTTGGGCCCTTCCACTGAGATCATGTAAACACCT10.78125No Hit
GGGCGGGGGGGGTGGGGGGGGGCGGGGCGGGGGGGGTGGGGGGGTGGGGGGTGGGGGCGGGCGGGGGGGGGGGT10.78125No Hit
ACATTAAACAGTTAATGTATTTGACATGAAAATTATATCAAGTTAACTTATTAGTTTTAATAGAGTTAAAAA10.78125No Hit
GGGTGGCTGACGTGCCAGACTTGGAGCCAGAGAATCGGTCAGGAATCCCT10.78125No Hit
AGGTAAACCAAAGCATCACGTTGACATTAGACCAAATACTTTTGATTCCC10.78125No Hit
TATTATGCAGACCCTGTGAAGGGCCGATTCACCATCTCCAGAGACGATGCCAAGAACTCACTGTATCTGCAAATG10.78125No Hit
GAGTACGGGTAGAAGAGCTCCTAAGTTAGGACCAAGAGGGAACCATTCAAACCCCAGCGCAGCTTCTCTAACT10.78125No Hit
CACATGTAACCAAACAGCTCAAACCTCCATCAACTCATCGACAACGAGACTGCCAAGCAAAAACACCACGACGCC10.78125No Hit
TTACGGTACTTGTTGACTATCGGTCTCGTGCCGGTATTTAGCCTTAGATGGAGTTTACAACCCGATTTGGGCT10.78125No Hit
GACTTGGGCATCCCGGTAGGAGCCCAGCCAGGGCACCACCACCTTCGCTG10.78125No Hit
ACTCCACGGTGCTCCCTTCATGCGTGACCTGGCAGCTGTAGCTTTTGTGGGACTTCCACTGCTCAGGCGTCAGGC10.78125No Hit
NGAAGTACCTGACTTGGGCATCCCGGTAGGAGCCAAGCAAGGGCACCACC10.78125No Hit
GGAGAACACCACACCCTCCAAACAAAGCAACAACAATTACGCGGCCAGCAGCTACCTGAGCCTGACGCATGAA10.78125No Hit
GCCGCAGGGCGTGCAGGAAGGCTGAGAGTCCCTCCATCACCAGCAGGATAGCCCCGGTCATCACGGCAAAGGCGG10.78125No Hit
CCCTCATGCTGCCCCCCCCGCCTGTCACTGCACCGACCGGCCCTCGAGGC10.78125No Hit
ATCAACGCAGAGTACGGGTGACCACGGGTGACGGGGAATCAGGGTTCGAT10.78125No Hit
CCCAAAAAAAAGTGTCACACAACAGGCCAGCTACGACCGCACCAAAAGCCGAAGCACCACCCTAACGCAAAGC10.78125No Hit
AGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTC10.78125No Hit
GTCTTGGACTCGGGGTAGGCAGCACTCCAAGAGAAGCTCTTCCCATAGTTCCAATGCTCGGCACACCCCGGCAGG10.78125No Hit
GACAGCTAGTCTCCCGTGGTGGGGGGTGAGGGTTGAGAACCTATGAACAT10.78125No Hit
GGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCG10.78125No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGG10.78125No Hit
GTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGC10.78125No Hit
ACCATCTCCTGCACTGGCACCAGCACTGACATTGGTCGTTATAACTATGTCTCCTGCTACCAACAACCCCCAGCC10.78125No Hit
GGTCAACGAAGTGCCGATGACGCTGATCGGCAAGCCCGGCCTGCCGGCCA10.78125No Hit
CACATGGGGCAGTTTACCCGCCGATCGGTCTTGGCTGTTGTTTGTGATGT10.78125No Hit
GGACTCACCAAACAGCACATCACACTGGACACCTTTTAAAAAAGCAACAA10.78125No Hit
GGCTCAGGTAGCTGCTGGCCGCGTACTTGTTGTTGCTCTGTTTGGAGGGT10.78125No Hit
GAGTTTTATTTTCTCCCCTTGTTTATTTGTTTAATGCTAGAAACTGTATT10.78125No Hit
GTATCAACGCAGAGTACGGGGGGGCTGTGCGAGAGCAGCGACTTAGAATG10.78125No Hit
CTGCTCCTCAGTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGACCC10.78125No Hit
GACAAGTTCACCAACCGGCCCCCAACGGAGCAACCCACAAGCCCAGGGAC10.78125No Hit
GTTATCTACTGTTTGCATTAATAAATTAAATCTCAATAGGGTATTCTCGTCTTGCTGTGTTATGCCCGCCTCTTC10.78125No Hit
GTCACAAACTGCACCAAGCATGCCACTAAGTGAAGATCATATGATCATCAGGCTCCTGCTCCTGACCCGAT10.78125No Hit
ATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCATGC10.78125No Hit
ATCAACGCACAGTACGGGCGCCCTCAAGTGGGAAGAGCGCTGTTCAAGGACCACCTGAGCGTGACCTCTGTGGTT10.78125No Hit
TTCAAATTCATTGGTAATAAATATGCTAACTTTCTGAATCAAAATGGAGTGCCTCTCAAGAAAAAGAGCTATGC10.78125No Hit
GTAAGGGGGGGAATGTGAGGGAGATAGGGAGCGGGCTGGGGTACGGCGGT10.78125No Hit
GCGGGGCGGGGGGGGGCGGCGGGGGGGGGGCGGGGGGCCGGGGGGTGGGG10.78125No Hit
GTCTTGGACCTGACTGTTGCAGCTTAACCTGTGACAGGACACCCCATGGGAGGCCCAGCACGGGCAGGAAGATG10.78125No Hit
GTGCTGCTGAGGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCGGTGACACTCTCCTGGGAGTTACCCGAGTGGAGG10.78125No Hit
ATACAAGAACAACTCTGACATCAGCAGCACCCGGGGCTTCCCATCAGTCC10.78125No Hit
ATGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTTCTACCCCAGCGACATCGCCGTGGAGTGGG10.78125No Hit
ATCCAGTATGCCCTTCGCACCTTGGGAAGTCGGGGCTACATTCCCATTTA10.78125No Hit
GTTCAACGCCGTTGGCGAAGACAGATGATGGAGGTGCCGAGAATCTGAGT10.78125No Hit
CTCTTAGACTATGTTTTTATTTTTGTTTATTTACCCCCCTCCCT10.78125No Hit
CCCCTGAGGGCCGCTTAGTGACGTCATAAATCATGAGTTTGGGGGCTTTG10.78125No Hit
GTATCACCGCAGAGTACGGGACTCGCGTCGGTTGGCGACTCCCGGACGTAGGTAGTTTGTTGGGCCGGGGTCTG10.78125No Hit
CAAATAGAGTCCTTGAGTCGAGGAGGTCTGAGACAGGCGTGGGGCCATAAATGTCAGAGGGGACTCAGCGGGGG10.78125No Hit
GAGTGAAATGTGTCCCAGACCCACCGCCACTGAACCTTGACGGGACCCCACTTTGCAAACTGGATGCAGCAT10.78125No Hit
CTATTGTCCTGTGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAACAAAAACAAAA10.78125No Hit
ACTGTTTGCTGCACAGCTCCGGGCAGGAAGCCGAAAACGCTTCGTATACT10.78125No Hit
GCACACAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATGAAGACAGATGGTGCAGCCAC10.78125No Hit
GGGCGGGGCCGGGGCGGGGGGGGGGGGGGGGGGGGGGGCGGCGGGGGCGGGGGGGGGGGGGGGGGGGGGG10.78125No Hit
TATCCACGGAGAGGTCTGTT10.78125No Hit
GGAATAAAATGAGACTAGATTTTTTATTTTTTTTTGTTGTTTATAAGTTA10.78125No Hit
GACTTCTCAGGCGTAGACAAAGTGTATCTCGTAGTCAGCTTTGCTAAGCGTCAGGGTGAGGCGGAGGCTGAAGG10.78125No Hit
AGTCATCAGTCACCATGGGGCAGCCGATGAGGTCTAGAGAGCAAATGAAG10.78125No Hit
GGGGAGAGAGACCCCTCCCCTGGGATCCTGCAGCTCCAGGCTCCCGTGGGTGGGGTTAGAGTTGGGAACCTATGA10.78125No Hit
CAAAAAAAATGCACATAATCCAAAGCAAAGTTCTTCATCATCCAGTAACCTGAATCTTATACACAACTCAC10.78125No Hit
CCTGGGATCCTGCAGCTCTAGTCTCCCGTGGTGGGGGGTGAGGGTTGAGA10.78125No Hit
CCCCAGATGCCTGCTATCCTGACTAATTTAAGTCATTGCTGACTGCATAG10.78125No Hit
GCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCA10.78125No Hit
GTGTGAAGGCCAGCGGCAGGGCCTCGTGGCACACCATCCAGGAGAAAGTCTCACCCGTCATCCACACGGCGGC10.78125No Hit
ATTTAAAGGCAAGACAGGTGCCACCAGCCCATAAAATTAAATATAAAATATATTATATAAAACTTTCTCCATTTA10.78125No Hit
GTCTTGAAGGGGCTCATCTCGTTTAAAGCGAATGATATAGAAAAGGCAGT10.78125No Hit
GGGCTGTAGAGCTCTATGCCGATCGCCTGTCCCAACTAAGTAAGGCAACAAAATCGTGAACTCCCGGAAGCTGG10.78125No Hit
CCTCCAAACAAAGCAACAACAAGTCCGCGGCCAGCAGCTACCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACA10.78125No Hit
ACGGCGTCCTGCGGGTGGGGGAAGAGGAGGGGGGCGCGGGGGGGACCTAGGCGGGCGGGGTG10.78125No Hit
GCTTCAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAA10.78125No Hit
GTCCTCGTGCACGTAGGTGAGGACGGTGACAGCACGTCACGTTATGT10.78125No Hit
GGCTGGATTGCAATTGTGTAATCTCGGCTAGCTGCAACCTCCGCCTCAGA10.78125No Hit
GATTATTACTGCTGCTCATTTGCAGGCAGCAACAATATATATCTGTTCGGAACTGGGACCAAGGTCACCGTCCT10.78125No Hit
ACAGTGTGATTCAACATGTCACCCAATCCTTATGTGTGGGTTCCTGGATT10.78125No Hit
CACCTGAGATTTAACCGATTCCACGGCGAGATCCACCTTCCACTGTACTTTCGCCTCTCTGTTATAGAAGTTATT10.78125No Hit
TCACAGTCCTTCCCCTCAGGAAAAAGAATGAAATGTCCTCCATTTCTGGG10.78125No Hit
ACCATTTGCTTTTCTGGGGAGTCCTGGCGGTTTTTATTAAGGCTGTTCAT10.78125No Hit
ATACATGCCTCAGGCCATGGGACAGTTGCAACAGCAGTTAAATGGACTGTAAGTCAGTGAAGGTCATGATTCTGA10.78125No Hit
ACAGCTGGATGCAGCATAGAGCACGCGCTTAGGGGCTTTCCCTGGTTGCTGCTGAGACCAATTTAAATAGGTG10.78125No Hit
AAGCTCCTCAGAGGAGGGCGGGAACAGAGTGACCGAGGGGGCAGCCTTGG10.78125No Hit
GACGCAGCAAAACCTGCAAGGAACACTCTTTCAGGAAGTTTAAGAAAGAA10.78125No Hit
GGATAATTTAATGGGTTAAAAAATGTGGATTTAATGAGGACCTTCATAATTTTTCCATACTTGACCACAGATGAA10.78125No Hit
GGCGAGGACCACGTTCCCATCTGGCTGGGTGCTGCAGAGGCTCAGCGGGTAGAGGTTGGGGCTGGGCGGGGATG10.78125No Hit
CTCCATCCTCACACTAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAGATAGAATTAACAATATTATTATAA10.78125No Hit
CATGATTTCTGACGTCAGTCAGCGGCCCGCAGGGGTCCCTGATCGCTTCT10.78125No Hit
GAGTACGAAGTCGACGCCCGAACGGCGCAGCGATTCCATCACCGCGTGCTCGGCTTTGTCCCACAGCTCGTCGG10.78125No Hit
GCATCTGCGAGGATGACTGGAATTCCGGGGAGAGGTTCACGTGCACCGTG10.78125No Hit
TCTTATACACATCTGGCGCTGCCGACGAGTAGAGAGGTGTAGATGTCGGT10.78125No Hit
GTTGGGAACAAAGGCATAGCTAAGTCGCAGATGAGTGCCAGGGGGTATCGCATCTTTAACG10.78125No Hit
CTCCCTGCGTCATGGATTTCAAGGTCTTTTAAACACCTTCGGTTTAATCTCTTTTTAAAAGATCGCCTTCAAATT10.78125No Hit
TTCCAGGACATGGACACGCAGTCATAGGTGCTCAGGTATCTGACCAGGCAGGTCAACTTCGTGTACTATGAGATG10.78125No Hit
ATTAGGAGCTGTCACTGAACGAGCTGGTTACGCTGACATGCCTCTGTATCTTATACACATCTGACGCTGACGACT10.78125No Hit
TCTCCACGGTGCTCCCTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTGG10.78125No Hit
GGGGTGGGGCCGGGGGTGGGTGGGGGGCGGGCTTGGGGCGGGGGGGGGGGGGTGGGGGTGGGGGGGGGGTG10.78125No Hit
CGTAATCCAACAGACAATGGAAAGTCAAATATCAAGAATTGCTATAAGTCTGCCTTAAATCCATCAGACATTAA10.78125No Hit
GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTA10.78125No Hit
GGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCCCTGGGATCCTGCAGCTCTAGTCTCCCGTGGTGGGGGG10.78125No Hit
AGCAAGGAGTCCGAGGAGAAGCATCATCCAGGCCATGGTGGGGACACTCA10.78125No Hit
TCCCAGGACCGCCGCGAGGGCTGCGCGCGGATCATCTGGCGCGACCCGCC10.78125No Hit
GGGGGGGGGGGGGGCGGCGCGGCGCGGGGGGCGGGGGGTGCGGGGGGGGG10.78125No Hit
ATATACGAGTGGGACCACAGCTGTGTAGCACTTGTTTCTGTCATAAGTGTAGCAGGTCTCTGTAGCACTGTCTTC10.78125No Hit
GACTTGGGATGGGGAGAGAGACCCCTCCCCTGGGATCCTGCAGCTCCAGG10.78125No Hit
GCGCACTACAGCCCAGAACTCCTGGACTCAAGCGATCCTCCAGCCTCAGC10.78125No Hit
CCAGAGCTCCAGACAATGTCTGTCTCCTTCCTCATCTTCCTGCCCGTGCT10.78125No Hit
GGTCAAAGAAGAGCTGGAGGACCCCAAAACGGCTAGCTCCCCTCTGGAAAAACCGTCACAGGCCAA10.78125No Hit
AAGAAACAAATACCTCAATTATTGATTTTGAGTACTGTACTATCCTGTAAATATAACTTAAGCAGGTTTGTTTTC10.78125No Hit
AAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGC10.78125No Hit
AGACAGGGATAGTAGCCTGAGTGTTGTGGTATTTGGCGGATGGACCGAGC10.78125No Hit
GACCTGCACGCCACTTAACACGATGTACCAGCCACATAGGTCACGCTCAGCACCTCCTACAACAGCGCTCATCAC10.78125No Hit
GTTTACTTTATATGGGTGGTGGCATGGTGTTCGGCGGAGGGACCAGGCTG10.78125No Hit
AAAATGGAGAGCCTCTCAAGAAAAAGAGCTATGCAGTCAGCAATGACTTA10.78125No Hit
GTGGGAGGAGAGACCCCTCCCCTGGGATCCTGCAGCTCTAGTCTCCCGTGGTGGGGGGTGAGGGTTGAGAACCT10.78125No Hit
CATTATTACTGCAGCTCATATGCAGGCAGGAACGGTGTGTTATTCGGTGG10.78125No Hit
CTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTTGGACTGCCACTGCTCA10.78125No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTTATT50.0136.069
AAGTTAT50.0136.068