EGAF00004686462 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004686462
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	136110
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3309	2.4311218867092794	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	320	0.23510396003232678	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	310	0.2277569612813166	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	264	0.1939607670266696	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	229	0.16824627139813386	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	225	0.1653074718977298	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	224	0.16457277202262874	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	204	0.14987877452060833	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	189	0.138858276394093	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	154	0.11314378076555727	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	151	0.11093968114025421	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	149	0.10947028139005216	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	147	0.10800088163985012	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	141	0.10359268238924399	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTGTTCT	20	0.002141687	70.620155	66
GTGCGAA	40	0.0034974546	62.3607	70
CTTAAAC	20	0.0037333295	61.38876	54
GTGCAAG	15	0.004100352	59.96427	17
CTTACGG	15	0.0041363733	59.832047	3
CGAATAC	20	0.0047354475	57.813564	47
AAGATCG	45	0.0055755135	55.431736	70
AGATCCG	20	0.005769485	55.001015	42
ACGTTAA	30	2.0986763E-5	49.91507	1
GAATAAT	30	0.009718189	48.195084	67
CGTTAAG	35	5.239906E-5	42.752888	2
CCCTTGA	45	4.892663E-6	39.932056	1
TTGAACA	35	0.0027104425	34.17718	4
TGTTCTT	45	0.0038612008	31.791254	40
CAGGGTA	40	0.0051743183	29.949043	1
GCTTGTA	60	3.5177924E-5	29.938028	15
TGCTTGT	60	3.5355104E-5	29.916023	14
GTTAAGT	40	0.0052023213	29.916023	3
TAAGTAC	40	0.0052116825	29.905031	5
TTAAGTA	40	0.0052116825	29.905031	4