EGAF00004686524 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004686524
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1227388
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3418	0.2784775474422106	No Hit
GTATTACTGTCAGCAGTATGGTAGCTCCCCGCTCACTTTCGGCGGAGGGA	2820	0.22975619771417027	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	2300	0.18738980664630908	No Hit
GTCTAGGACAGACTTCACTCTCACGATCAGCAGACTGGAGCCTGAAGATT	2136	0.17402809869413746	No Hit
GTAATATACGGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGATACA	2067	0.1684064044947482	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1755	0.14298656985403146	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	1691	0.1377722447995255	No Hit
CAGTAATACACTGCAAAATCTTCAGGCTCCAGTCTGCTGATCGTGAGAGTGAAGTCTGTCCTAGACCCACTGCCA	1668	0.13589834673306242	No Hit
GTCCTAGACCCACTGCCACTGAGCCTGTCTGGGATGCCAGTGGCCCTCCT	1608	0.13100991699446304	No Hit
GTATATTACTGTGCGAAAGATCAGGTTGTTGCGGTCTCGGGCCTTGATGC	1587	0.12929896658595327	No Hit
GTATGGTAGCTCCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCAT	1522	0.12400316770247062	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	1490	0.12139600517521762	No Hit
GTGTATTACTGTCAGCAGTATGGTAGCTCCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAA	1458	0.11878884264796463	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	1334	0.10868608785485927	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	1250	0.10184228622082014	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	3505	38.07274	1
GGTATCA	1560	36.754456	1
TATCAAC	4180	31.826097	2
ATCAACG	4195	31.371695	3
TCAACGC	4210	31.09035	4
CAACGCA	4245	30.914307	5
AACGCAG	4325	30.500101	6
ATACGGC	765	30.298695	6
TATACGG	755	30.248533	5
TACGGCC	770	29.659275	7
GGGACAA	960	28.77671	70
CGCAGAG	4555	28.660704	8
AGAGTAC	4605	28.420057	11
CCGTGTC	825	28.0963	12
GCAGAGT	4690	27.908392	9
GTAATAT	845	27.868765	1
GCCGTGT	840	27.590082	11
AATATAC	885	26.967299	3
CAGAGTA	4895	26.94631	10
TCTGGAG	1105	26.875624	70